RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 NKIRAS2Q9NYR9 191 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 DNAJC15Q9Y5T4 150 aa11.73□□□□□ -0.53
SNX1-214ENST00000625244 CLDN24A6NM45 220 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 TPD52L2O43399 206 aaKnown RBP11.72□□□□□ -0.53
SNX1-214ENST00000625244 ITM2AO43736 263 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 STX11O75558 287 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 PLATP00750 562 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 CSF1P09603 554 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 LINC00032P0C843 101 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 CD79AP11912 226 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 TACR3P29371 465 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 POLR2HP52434 150 aaKnown RBP11.72□□□□□ -0.53
SNX1-214ENST00000625244 GALK2Q01415 458 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 HNRNPA0Q13151 305 aaKnown RBP11.72□□□□□ -0.53
SNX1-214ENST00000625244 PDCD1Q15116 288 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 TSTQ16762 297 aaKnown RBP11.72□□□□□ -0.53
SNX1-214ENST00000625244 GSG1Q2KHT4 349 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 PRAMEF8Q5VWM4 474 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 PRAMEF7Q5VXH5 474 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 HMGN2P46Q86SG4 172 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 ZNF781Q8N8C0 355 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 ANKK1Q8NFD2 765 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 CCL17Q92583 94 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 METTL2AQ96IZ6 378 aaKnown RBP11.72□□□□□ -0.53
SNX1-214ENST00000625244 PPP3R2Q96LZ3 170 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 PRDM13Q9H4Q3 707 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 TNFRSF12AQ9NP84 129 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 C1orf109Q9NX04 203 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 ADPRHL2Q9NX46 363 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 SLC35A3Q9Y2D2 325 aa11.72□□□□□ -0.53
SNX1-214ENST00000625244 POLR3KQ9Y2Y1 108 aaPredicted RBP11.72□□□□□ -0.53
SNX1-214ENST00000625244 TMEM233B4DJY2 109 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 SCN2BO60939 215 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 MAKP20794 623 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 MAPK1P28482 360 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 CD80P33681 288 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 SEC61A1P61619 476 aaKnown RBP11.71□□□□□ -0.53
SNX1-214ENST00000625244 PAX8Q06710 450 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 SPDYE7PQ495Y7 208 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 AP1ARQ63HQ0 302 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 CMIPQ8IY22 773 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 KDM8Q8N371 416 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 OR5AK3PQ8NH89 298 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 PSMA8Q8TAA3 256 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 TUBGCP3Q96CW5 907 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 ZG16BQ96DA0 208 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 FCRL1Q96LA6 429 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 SLC30A2Q9BRI3 323 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 ZNF350Q9GZX5 532 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 SAP30LQ9HAJ7 183 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 AURKAIP1Q9NWT8 199 aaPredicted RBP11.71□□□□□ -0.53
SNX1-214ENST00000625244 TMED5Q9Y3A6 229 aa11.71□□□□□ -0.53
SNX1-214ENST00000625244 TENM2Q9NT68 2774 aa11.71□□□□□ -0.54
SNX1-214ENST00000625244 AGAP5A6NIR3 686 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 TRPC5OSA6NMA1 111 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 SNNO75324 88 aaPredicted RBP11.7□□□□□ -0.54
SNX1-214ENST00000625244 SLC43A1O75387 559 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 VAMP5O95183 116 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 OPN1MWP04001 364 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 CHRM4P08173 479 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 OPN1MW2P0DN77 364 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 OPN1MW3P0DN78 364 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 PRPH2P23942 346 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 PTDSS1P48651 473 aaKnown RBP11.7□□□□□ -0.54
SNX1-214ENST00000625244 CLDN17P56750 224 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 MAD2L1Q13257 205 aaPredicted RBP11.7□□□□□ -0.54
SNX1-214ENST00000625244 ARHGAP11BQ3KRB8 267 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 GALNTL6Q49A17 601 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 RGS7BPQ6MZT1 257 aaPredicted RBP11.7□□□□□ -0.54
SNX1-214ENST00000625244 OR7A2PQ8NGA2 310 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 SNX33Q8WV41 574 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 CNOT9Q92600 299 aaKnown RBP11.7□□□□□ -0.54
SNX1-214ENST00000625244 SORT1Q99523 831 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 EXOSC3Q9NQT5 275 aaKnown RBP11.7□□□□□ -0.54
SNX1-214ENST00000625244 SLC7A8Q9UHI5 535 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 GPR160Q9UJ42 338 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 HAO1Q9UJM8 370 aa11.7□□□□□ -0.54
SNX1-214ENST00000625244 IGLV3-9A0A075B6K5 115 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 TRAV40A0A0B4J280 105 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 ZNF99A8MXY4 864 aaPredicted RBP11.69□□□□□ -0.54
SNX1-214ENST00000625244 H0YL77 283 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 PIP5K1CO60331 668 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 C6orf47O95873 294 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 KITP10721 976 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 LAMP1P11279 417 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 ARRB2P32121 409 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 GIPRP48546 466 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 KLF3P57682 345 aaPredicted RBP11.69□□□□□ -0.54
SNX1-214ENST00000625244 RPL38P63173 70 aaKnown RBP11.69□□□□□ -0.54
SNX1-214ENST00000625244 KCNJ10P78508 379 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 UGT3A2Q3SY77 523 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 PHYHD1Q5SRE7 291 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 TYW3Q6IPR3 259 aaKnown RBP11.69□□□□□ -0.54
SNX1-214ENST00000625244 BRD3OSQ6XYD6 125 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 Q6YL49 198 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 GPR137CQ8N3F9 429 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 FNDC5Q8NAU1 212 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms