RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 WDR31Q8NA23 367 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 ELOA3Q8NG57 546 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 DNAJA3Q96EY1 480 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 TMEM43Q9BTV4 400 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 FNDC11Q9BVV2 318 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 SLC7A10Q9NS82 523 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 MAN2C1Q9NTJ4 1040 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 FAIMQ9NVQ4 179 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 ARMC1Q9NVT9 282 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 RHCGQ9UBD6 479 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 AURKCQ9UQB9 309 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 ATRQ13535 2644 aa11.71□□□□□ -0.54
CTSA-213ENST00000606782 ANKRD65E5RJM6 399 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 FZD7O75084 574 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 DIRAS1O95057 198 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 VAMP5O95183 116 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 CD40P25942 277 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 RBM34P42696 430 aaKnown RBP11.7□□□□□ -0.54
CTSA-213ENST00000606782 SMIM11AP58511 58 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 TGFBR3Q03167 851 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 KRTAP1-1Q07627 177 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 TRAM2Q15035 370 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 CLEC12BQ2HXU8 276 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 OTUD3Q5T2D3 398 aaPredicted RBP11.7□□□□□ -0.54
CTSA-213ENST00000606782 TSPO2Q5TGU0 170 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 KLHL17Q6TDP4 642 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 CASP12Q6UXS9 341 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 WDR88Q6ZMY6 472 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 C10orf67Q8IYJ2 551 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 TMEM99Q8N816 258 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 POMGNT2Q8NAT1 580 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 OR9K2Q8NGE7 335 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 GTPBP3Q969Y2 492 aaKnown RBP11.7□□□□□ -0.54
CTSA-213ENST00000606782 HS6ST2Q96MM7 605 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 FUZQ9BT04 418 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 SLCO5A1Q9H2Y9 848 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 ANKRD19PQ9H560 264 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
CTSA-213ENST00000606782 E7EQL1 145 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 FKBP6O75344 327 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 KRT36O76013 467 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 AKR7A3O95154 331 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 IGF2P01344 180 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 IGHV4-39P01824 125 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 H1F0P07305 194 aaKnown RBP11.69□□□□□ -0.54
CTSA-213ENST00000606782 MPGP29372 298 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 CDKN1AP38936 164 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 LIMS1P48059 325 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 ERFP50548 548 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 CDH11P55287 796 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 OR7A5Q15622 319 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 AGAP6Q5VW22 663 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 C11orf71Q6IPW1 123 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 TTC33Q6PID6 262 aaPredicted RBP11.69□□□□□ -0.54
CTSA-213ENST00000606782 C5orf46Q6UWT4 87 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 RNF113BQ8IZP6 322 aaKnown RBP11.69□□□□□ -0.54
CTSA-213ENST00000606782 OR6S1Q8NH40 331 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 OR52N5Q8NH56 324 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 RNF217Q8TC41 542 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 TAAR8Q969N4 342 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 KTI12Q96EK9 354 aaPredicted RBP11.69□□□□□ -0.54
CTSA-213ENST00000606782 RSRC1Q96IZ7 334 aaKnown RBP11.69□□□□□ -0.54
CTSA-213ENST00000606782 DHRS9Q9BPW9 319 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 SLC19A3Q9BZV2 496 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 YY1AP1Q9H869 796 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 BARX1Q9HBU1 254 aaPredicted RBP11.69□□□□□ -0.54
CTSA-213ENST00000606782 SLC17A5Q9NRA2 495 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 UPB1Q9UBR1 384 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 AMDHD2Q9Y303 409 aa11.69□□□□□ -0.54
CTSA-213ENST00000606782 TRAV36DV7A0A075B6V5 113 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 A0A087WUU8 490 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 HTR3EA5X5Y0 456 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 MT-ND1P03886 318 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 PAX7P23759 505 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 TTKP33981 857 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 ZNF83P51522 516 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 C1orf140Q5VVS0 124 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 OR2T5Q6IEZ7 315 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 AAED1Q7RTV5 226 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 LSRQ86X29 649 aaPredicted RBP11.68□□□□□ -0.54
CTSA-213ENST00000606782 OR2T29Q8NH02 315 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 MFSD8Q8NHS3 518 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 SLC7A13Q8TCU3 470 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 TMEM255BQ8WV15 326 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 TMEM239Q8WW34 195 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 ZNF385AQ96PM9 386 aaKnown RBP11.68□□□□□ -0.54
CTSA-213ENST00000606782 PTDSS2Q9BVG9 487 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 REG4Q9BYZ8 158 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 MEPEQ9NQ76 525 aaPredicted RBP11.68□□□□□ -0.54
CTSA-213ENST00000606782 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 B3GALT5Q9Y2C3 310 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 COL6A5A8TX70 2615 aa11.68□□□□□ -0.54
CTSA-213ENST00000606782 TRBV4-1A0A0J9YWV2 114 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 OR6C65A6NJZ3 312 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 FTCDNL1E5RQL4 147 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 OR2T1O43869 369 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 NDUFS7O75251 213 aa11.67□□□□□ -0.54
CTSA-213ENST00000606782 ENTPD5O75356 428 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms