RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ADAM19Q9H013 955 aa14.27□□□□□ -0.13
SHKBP1-215ENST00000597649 MYOZ1Q9NP98 299 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-215ENST00000597649 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-215ENST00000597649 ADPRHL2Q9NX46 363 aa14.27□□□□□ -0.13
SHKBP1-215ENST00000597649 MAGEL2Q9UJ55 1249 aa14.27□□□□□ -0.13
SHKBP1-215ENST00000597649 TGP01266 2768 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 TMEM129A0AVI4 362 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 LGI1O95970 557 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 CALCRP30988 508 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 SRP14P37108 136 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 IDH3GP51553 393 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 TUBA1BP68363 451 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 TUBA4AP68366 448 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 HGFACQ04756 655 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 TBRG1Q3YBR2 411 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 DHRS4L2Q6PKH6 230 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 PAQR6Q6TCH4 344 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 C12orf54Q6X4T0 127 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 TUBA1AQ71U36 451 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 LINGO2Q7L985 606 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 AAED1Q7RTV5 226 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 ZNF440Q8IYI8 595 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 OR9K2Q8NGE7 335 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 LZICQ8WZA0 190 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 BCL2L2Q92843 193 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 TAMM41Q96BW9 452 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 DOK1Q99704 481 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 KATNB1Q9BVA0 655 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 RLIMQ9NVW2 624 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 DYSFO75923 2080 aa14.26□□□□□ -0.13
SHKBP1-215ENST00000597649 CDHR4A6H8M9 788 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 GSC2O15499 205 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 ZNF208O43345 1280 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 SPRY1O43609 319 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 AKR7A3O95154 331 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 ZNF682O95780 498 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 CECR9P0C854 216 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 DAOP14920 347 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 UQCRBP14927 111 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 APEX1P27695 318 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 TACR3P29371 465 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 HTR3AP46098 478 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 PPOXP50336 477 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 POLR2HP52434 150 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 NCALDP61601 193 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 NAAAQ02083 359 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 TRIP10Q15642 601 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 CYBRD1Q53TN4 286 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 OTUD3Q5T2D3 398 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 KLHL24Q6TFL4 600 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 CLIP4Q8N3C7 705 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 LINC01356Q8N9X3 169 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 POMGNT2Q8NAT1 580 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 OR1K1Q8NGR3 316 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 CCDC124Q96CT7 223 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 DDIT4LQ96D03 193 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 TPD52L3Q96J77 140 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 CLPTM1LQ96KA5 538 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 SNX18Q96RF0 628 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 PCDHAC1Q9H158 963 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 LRMDAQ9H2I8 198 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 CRNNQ9UBG3 495 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 RPS6KA6Q9UK32 745 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 BAG5Q9UL15 447 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 SNX13Q9Y5W8 968 aa14.25□□□□□ -0.13
SHKBP1-215ENST00000597649 CFAP73A6NFT4 308 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 LIPT2A6NK58 231 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 LYNX1G3V0Z9 82 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 TPST1O60507 370 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 SERPINA1P01009 418 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 IGLV1-44P01699 117 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 CRYAAP02489 173 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 LYNX1P0DP58 116 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 THBS4P35443 961 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 P2RY4P51582 365 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 CHN2P52757 468 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 CDH15P55291 814 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 RIN1Q13671 783 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 TRIM25Q14258 630 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 MYPOPQ86VE0 399 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 DHFR2Q86XF0 187 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 HPS1Q92902 700 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 LRGUKQ96M69 825 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 NSMCE2Q96MF7 247 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 CADM1Q9BY67 442 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 RAB1BQ9H0U4 201 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 MMADHCQ9H3L0 296 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 NELFAQ9H3P2 528 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 MUC13Q9H3R2 512 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 EVA1AQ9H8M9 152 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 OBP2BQ9NPH6 170 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 CMYA5Q8N3K9 4069 aa14.24□□□□□ -0.13
SHKBP1-215ENST00000597649 A0A096LPE4 126 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 A0A1W2PPZ6 126 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 ARPC2O15144 300 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 CELA3BP08861 270 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 GKN3PP0CG01 181 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 EGR1P18146 543 aa14.23□□□□□ -0.13
SHKBP1-215ENST00000597649 SLC1A3P43003 542 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms