RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 C14orf144Q96I85 54 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 C5orf34Q96MH7 638 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 PITX2Q99697 317 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 SOX7Q9BT81 388 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 PPP4R1LQ9P1A2 415 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 IL17BQ9UHF5 180 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 EP300Q09472 2414 aaPredicted RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 LOC390937A0A1W2PQ73 354 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 AIPO00170 330 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 HCRTR1O43613 425 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 CSO75390 466 aaKnown RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 UBXN7O94888 489 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 RPP14O95059 124 aaKnown RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 CSF2RBP32927 897 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 SDC2P34741 201 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 ILKQ13418 452 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 ATXN7L3Q14CW9 347 aaPredicted RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 NTRK2Q16620 822 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 BEX5Q5H9J7 111 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 ALG10BQ5I7T1 473 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 IDNKQ5T6J7 187 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 TCEAL6Q6IPX3 200 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 RAB12Q6IQ22 244 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 ZNF836Q6ZNA1 936 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 ZNF433Q8N7K0 673 aaPredicted RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 TMEM52Q8NDY8 209 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 OSTF1Q92882 214 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 HEXA-AS1Q9H8Q6 139 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 Q9N2J8 555 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 UNC119BA6NIH7 251 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 MAGEB4O15481 346 aaPredicted RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 HCN1O60741 890 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 RECKO95980 971 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 TFP02787 698 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 NMBP08949 121 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 BTG1P62324 171 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 ELOCQ15369 112 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 TGIF1Q15583 401 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 OR1Q1Q15612 314 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 OR8G1Q15617 311 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 MAPK14Q16539 360 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 SYT14P1Q58G82 188 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 SFRP4Q6FHJ7 346 aaPredicted RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 MEIOBQ8N635 442 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 OR2T4Q8NH00 348 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 ZNF582Q96NG8 517 aaPredicted RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 SDF2Q99470 211 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 NT5DC2Q9H857 520 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 ZFP64Q9NPA5 681 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 WSB2Q9NYS7 404 aaPredicted RBP9.06□□□□□ -0.96
USP35-201ENST00000526425 V9GYH0 126 aa9.06□□□□□ -0.96
USP35-201ENST00000526425 CNOT1A5YKK6 2376 aaKnown RBP9.05□□□□□ -0.96
USP35-201ENST00000526425 ACP2P11117 423 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 GIFP27352 417 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 CD38P28907 300 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 CXCL12P48061 93 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 PPA1Q15181 289 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 OTPQ5XKR4 325 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 OR7E24Q6IFN5 339 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 H3F3CQ6NXT2 135 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 ZNF321PQ8N8H1 164 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 TMEM239Q8WW34 195 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 KCTD7Q96MP8 289 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 OR2A5Q96R48 311 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 OR52D1Q9H346 318 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 POT1Q9NUX5 634 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 TRANK1O15050 2925 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 LRRK1Q38SD2 2015 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 NUP210Q8TEM1 1887 aaPredicted RBP9.05□□□□□ -0.96
USP35-201ENST00000526425 A0A1W2PPC1 479 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 TRAPPC13A5PLN9 417 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 TMEM229AB2RXF0 380 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 TMEM150CB9EJG8 249 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 SEMA7AO75326 666 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 GP1BAP07359 652 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 CT62P0C5K7 136 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 SOX18P35713 384 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 FOXL2P58012 376 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 UBE2IP63279 158 aaKnown RBP9.05□□□□□ -0.96
USP35-201ENST00000526425 BIKQ13323 160 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 ZNF658BQ4V348 819 aaPredicted RBP9.05□□□□□ -0.96
USP35-201ENST00000526425 OR5M10Q6IEU7 315 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 PUSL1Q8N0Z8 303 aaKnown RBP9.05□□□□□ -0.96
USP35-201ENST00000526425 GJD3Q8N144 294 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 NANOGP1Q8N7R0 232 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 CDRT4Q8N9R6 151 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 ZNF511Q8NB15 262 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 ZMYND19Q96E35 227 aaPredicted RBP9.05□□□□□ -0.96
USP35-201ENST00000526425 FOXN4Q96NZ1 517 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 MENTQ9BUN1 341 aa9.05□□□□□ -0.96
USP35-201ENST00000526425 A0A1W2PPC4 97 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 C11orf98E9PRG8 122 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ABCD4O14678 606 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 PHOX2AO14813 284 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 CASC3O15234 703 aaKnown RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 HRO43593 1189 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ANXA2P07355 339 aaKnown RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 DCNP07585 359 aaKnown RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 HCKP08631 526 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 PYCR1P32322 319 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms