RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 DUSP19Q8WTR2 217 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 RSPRY1Q96DX4 576 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 ALG12Q9BV10 488 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 MRM2Q9UI43 246 aaKnown RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 ZNF337Q9Y3M9 751 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 ADAM18Q9Y3Q7 739 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 HEBP2Q9Y5Z4 205 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 TMEM82A0PJX8 343 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 TMEM218A2RU14 115 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 OR5H14A6NHG9 310 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 TMEM200CA6NKL6 621 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 OR4C45A6NMZ5 311 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 CDC40O60508 579 aaKnown RBP eCLIP16.17■□□□□ 0.18
NUP54-205ENST00000507257 PQBP1O60828 265 aaKnown RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 CXCL14O95715 111 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 WNT11O96014 354 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 ACHEP22303 614 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 RPL4P36578 427 aaKnown RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 PRPS1P60891 318 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 PRICKLE4Q2TBC4 344 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 LIPNQ5VXI9 398 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 PLPP4Q5VZY2 271 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 C11orf87Q6NUJ2 197 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 ENPP7Q6UWV6 458 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 ACOT7LQ6ZUV0 252 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 OR2W3Q7Z3T1 314 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 LURAP1LQ8IV03 231 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 OR4N5Q8IXE1 308 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 EXD3Q8N9H8 876 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 MCHR2Q969V1 340 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 CTHRC1Q96CG8 243 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 PTCHD1Q96NR3 888 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 USB1Q9BQ65 265 aaKnown RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 EDEM2Q9BV94 578 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 POFUT1Q9H488 388 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 PHPT1Q9NRX4 125 aaPredicted RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 COA4Q9NYJ1 87 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 MLXQ9UH92 298 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 TMEM212A6NML5 194 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 ADAM11O75078 769 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 GABRA3P34903 492 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 DCDP81605 110 aaKnown RBP16.16■□□□□ 0.18
NUP54-205ENST00000507257 MGAT2Q10469 447 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 SNTB1Q13884 538 aaKnown RBP16.16■□□□□ 0.18
NUP54-205ENST00000507257 ZNF234Q14588 700 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 ELP2Q6IA86 826 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 DHRS7BQ6IAN0 325 aaPredicted RBP16.16■□□□□ 0.18
NUP54-205ENST00000507257 LIN54Q6MZP7 749 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 GABRG1Q8N1C3 465 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 STK35Q8TDR2 534 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 CCNL2Q96S94 520 aaPredicted RBP16.16■□□□□ 0.18
NUP54-205ENST00000507257 CHST6Q9GZX3 395 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 SLCO5A1Q9H2Y9 848 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 SFXN1Q9H9B4 322 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 TRPV4Q9HBA0 871 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.16■□□□□ 0.18
NUP54-205ENST00000507257 CARHSP1Q9Y2V2 147 aaKnown RBP16.16■□□□□ 0.18
NUP54-205ENST00000507257 PLEKHM1Q9Y4G2 1056 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 HCFC2Q9Y5Z7 792 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 EML5Q05BV3 1969 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 SCN3AQ9NY46 2000 aa16.16■□□□□ 0.18
NUP54-205ENST00000507257 TRAV8-7A0A075B6U6 113 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 A0A087WUJ7 227 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 SYNDIG1LA6NDD5 238 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 DISC1C4P0D8 188 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 RDH16O75452 317 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 CD3DP04234 171 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 INHAP05111 366 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 RAB13P51153 203 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 ERVK-25P63136 954 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 TCEAL5Q5H9L2 206 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 LSRQ86X29 649 aaPredicted RBP16.15■□□□□ 0.18
NUP54-205ENST00000507257 TMEM185AQ8NFB2 350 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 STEAP2Q8NFT2 490 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 GPR148Q8TDV2 347 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 FGF13Q92913 245 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 VWCEQ96DN2 955 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 Q96M85 177 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 TSNAXQ99598 290 aaKnown RBP16.15■□□□□ 0.18
NUP54-205ENST00000507257 C12orf57Q99622 126 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 UQCC2Q9BRT2 126 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 COMMD4Q9H0A8 199 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 WDR13Q9H1Z4 485 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 RRAGCQ9HB90 399 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 BIN3Q9NQY0 253 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 CDV3Q9UKY7 258 aaKnown RBP16.15■□□□□ 0.18
NUP54-205ENST00000507257 KCNK6Q9Y257 313 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 GOLGA4Q13439 2230 aaKnown RBP16.15■□□□□ 0.18
NUP54-205ENST00000507257 TBC1D3IA0A087WXS9 549 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 OR14I1A6ND48 311 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 IMPA2O14732 288 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 FGF16O43320 207 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 OR8G3PP0DMU2 310 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 LUMP51884 338 aaPredicted RBP16.15■□□□□ 0.18
NUP54-205ENST00000507257 MESP2Q0VG99 397 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 PLA2G7Q13093 441 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 FAM74A1Q5RGS3 127 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 TMEM205Q6UW68 189 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 KIRREL2Q6UWL6 708 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms