RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 BCL2L1Q07817 233 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 NCF4Q15080 339 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 Q3ZCU0 254 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 PAN3Q58A45 887 aaKnown RBP2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 SOHLH1Q5JUK2 328 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 SPESP1Q6UW49 350 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 CXCL17Q6UXB2 119 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 HDDC2Q7Z4H3 204 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 TMEM135Q86UB9 458 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZNF329Q86UD4 541 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 PIANPQ8IYJ0 282 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 RDH10Q8IZV5 341 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 PDIK1LQ8N165 341 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 CSGALNACT2Q8N6G5 542 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZNF564Q8TBZ8 553 aaPredicted RBP2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 SMARCD2Q92925 531 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 MSANTD3Q96H12 275 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 ITCHQ96J02 903 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 C9orf72Q96LT7 481 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 PELOQ9BRX2 385 aaKnown RBP2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 MRPL37Q9BZE1 423 aaKnown RBP2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 FBXO44Q9H4M3 255 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 RANBP3Q9H6Z4 567 aaPredicted RBP2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 ADAP2Q9NPF8 381 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 EXD2Q9NVH0 621 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 HRASLS2Q9NWW9 162 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 TREM2Q9NZC2 230 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 MYEF2Q9P2K5 600 aaKnown RBP2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 KLHL21Q9UJP4 597 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 MMP17Q9ULZ9 603 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 SLC17A4Q9Y2C5 497 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 TMEM94Q12767 1356 aa2.99□□□□□ -1.93
TRAPPC13-208ENST00000505553 IGLV8-61A0A075B6I0 122 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 IGKV1D-8A0A087WSZ0 117 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 IGHV3-35A0A0C4DH35 117 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 A0A1W2PPR1 153 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 E9PQ18 207 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 H7C0C1 242 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 POLR1CO15160 346 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 POLR3GO15318 223 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 RNF113AO15541 343 aaKnown RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 AIREO43918 545 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 EIF4E2O60573 245 aaKnown RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 CLIC3O95833 236 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 HLA-HP01893 362 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZP3P21754 424 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 CD82P27701 267 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 RORAP35398 523 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 TNFSF9P41273 254 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 CCNG1P51959 295 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 CXCL6P80162 114 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 PGGHGQ32M88 737 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZNF658Q5TYW1 1059 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 MLIPQ5VWP3 458 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZNF343Q6P1L6 599 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 UNQ9370/PRO34162Q6UXP9 181 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 GPRIN3Q6ZVF9 776 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 CMC1Q7Z7K0 106 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 LHFPL3Q86UP9 236 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 APRG1Q8IVJ8 170 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 CMTM1Q8IZ96 169 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 FAM58AQ8N1B3 248 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZNF557Q8N988 423 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 INO80EQ8NBZ0 244 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 TMEM104Q8NE00 496 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 OR10G3Q8NGC4 313 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 LYPD6BQ8NI32 183 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 SLC7A13Q8TCU3 470 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 AGAP11Q8TF27 550 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 ASB9Q96DX5 294 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 CSPG4P5Q96PW8 444 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 TMEM246Q9BRR3 403 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 C19orf24Q9BVV8 132 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 TRIM15Q9C019 465 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZYG11BQ9C0D3 744 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 GAL3ST2Q9H3Q3 398 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 NTN4Q9HB63 628 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZC4H2Q9NQZ6 224 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 AGPAT3Q9NRZ7 376 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 CCDC59Q9P031 241 aaKnown RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 IFNKQ9P0W0 207 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 APOBEC3BQ9UH17 382 aaKnown RBP2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 RSPH14Q9UHP6 348 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 BTNL2Q9UIR0 455 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 NEURL4Q96JN8 1562 aa2.98□□□□□ -1.93
TRAPPC13-208ENST00000505553 IGHV3OR16-13A0A075B7E8 117 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 A0A0G2JRQ6 117 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 A6NIZ1 184 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 K7N7A8 449 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 PSMD11O00231 422 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 MRPS12O15235 138 aaKnown RBP2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 YKT6O15498 198 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 FCN3O75636 299 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 CLPXO76031 633 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 SNAPINO95295 136 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 SEMG1P04279 462 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 CXCR2P25025 360 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 AQP1P29972 269 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 RAP1BP61224 184 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 SELENOTP62341 195 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms