RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 GMFGO60234 142 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 CTAG2O75638 210 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 PDE5AO76074 875 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 CH25HO95992 272 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 BCL10O95999 233 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 WNT11O96014 354 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 IGKV3-15P01624 115 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 IGLV1-44P01699 117 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 HRGP04196 525 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 CD14P08571 375 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ADORA3P0DMS8 318 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 IFI30P13284 250 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 NQO1P15559 274 aaKnown RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 PAX1P15863 534 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 TCN1P20061 433 aaPredicted RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 CBLP22681 906 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 TUBG1P23258 451 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 PTAFRP25105 342 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 SDHAP31040 664 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 RRM2P31350 389 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 NTF4P34130 210 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ARHGDIAP52565 204 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 BLVRAP53004 296 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 RPL27P61353 136 aaKnown RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 MRPS34P82930 218 aaKnown RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 TLE4Q04727 773 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 SF3A3Q12874 501 aaKnown RBP eCLIP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 C1DQ13901 141 aaKnown RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ATP6AP1Q15904 470 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 GABRA6Q16445 453 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ALG10Q5BKT4 473 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ANKRD16Q6P6B7 361 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 PODNL1Q6PEZ8 512 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 SHQ1Q6PI26 577 aaKnown RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 SMARCD3Q6STE5 483 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF620Q6ZNG0 422 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 SLC35D2Q76EJ3 337 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 NUFIP2Q7Z417 695 aaKnown RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 HMGN2P46Q86SG4 172 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 EGFL6Q8IUX8 553 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 CCDC103Q8IW40 242 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF100Q8IYN0 542 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 GPR137CQ8N3F9 429 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 SVOPLQ8N434 492 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 LNX2Q8N448 690 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF610Q8N9Z0 462 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 NOXO1Q8NFA2 376 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF519Q8TB69 540 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 CANT1Q8WVQ1 401 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ASB10Q8WXI3 467 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF566Q969W8 418 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 UTP4Q969X6 686 aaKnown RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 MBD6Q96DN6 1003 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF385AQ96PM9 386 aaKnown RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 BDH2Q9BUT1 245 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 CHID1Q9BWS9 393 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 GABARAPL1Q9H0R8 117 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 TUBG2Q9NRH3 451 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 INIPQ9NRY2 104 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 RASSF1Q9NS23 344 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 SLC7A10Q9NS82 523 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 C20orf141Q9NUB4 165 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 VSX1Q9NZR4 365 aaPredicted RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 C6orf203Q9P0P8 240 aaPredicted RBP4.48□□□□□ -1.69
HDAC6-223ENST00000480525 KCNG2Q9UJ96 466 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 CDH10Q9Y6N8 788 aa4.48□□□□□ -1.69
HDAC6-223ENST00000480525 FBN2P35556 2912 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 TRBV4-1A0A0J9YWV2 114 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SLC35F4A4IF30 521 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 NKX2-6A6NCS4 301 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF726A6NNF4 738 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 FAM90A27PA6NNH2 459 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 H3BSA7 217 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 M0R3G1 203 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 TNFRSF11BO00300 401 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CDC42EP2O14613 210 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CLOCKO15516 846 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 RAMP1O60894 148 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 FKBP6O75344 327 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CIB2O75838 187 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SMNDC1O75940 238 aaKnown RBP eCLIP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 FARS2O95363 451 aaKnown RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SNAP29O95721 258 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 HPRP00739 348 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CST1P01037 141 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 PTHP01270 115 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ITGA5P08648 1049 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SAGP10523 405 aaPredicted RBP4.47□□□□□ -1.69
HDAC6-223ENST00000480525 COX5BP10606 129 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ACADSP16219 412 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 TNFRSF1BP20333 461 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 MAKP20794 623 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 IGHV1-2P23083 117 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 IL32P24001 234 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 FASP25445 335 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CRABP1P29762 137 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 SLC6A6P31641 620 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 ARR3P36575 388 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 CSNK1A1P48729 337 aa4.47□□□□□ -1.69
HDAC6-223ENST00000480525 RPS6KA3P51812 740 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms