RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ABCA4P78363 2273 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 TRAV27A0A087WT01 109 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 CENPBD1B2RD01 187 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 MCIDASD6RGH6 385 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 PTP4A3O75365 173 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 RAD51DO75771 328 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 CST1P01037 141 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 F13BP05160 661 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 ITGA5P08648 1049 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 FPR3P25089 353 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 FOXG1P55316 489 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 SH3BGRP55822 239 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 TLE4Q04727 773 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 CAMK2DQ13557 499 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 FHL1Q13642 323 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 TSC22D1Q15714 1073 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 GABRA6Q16445 453 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 ACKR1Q16570 336 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 TIMM23BQ5SRD1 257 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 C1QTNF12Q5T7M4 302 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 HMBOX1Q6NT76 420 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 C1orf94Q6P1W5 598 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 C22orf34Q6ZV56 151 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 YTHDF3Q7Z739 585 aaKnown RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 ZER1Q7Z7L7 766 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 MEX3DQ86XN8 651 aaKnown RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 C20orf196Q8IYI0 205 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 C17orf78Q8N4C9 275 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 PAPD5Q8NDF8 572 aaKnown RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 OR4C15Q8NGM1 316 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 OR13C2Q8NGS9 318 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 OR6N1Q8NGY5 312 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 ZNF566Q969W8 418 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 BOD1Q96IK1 185 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 RSRC1Q96IZ7 334 aaKnown RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 MUS81Q96NY9 551 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 ALKBH3Q96Q83 286 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 TXNIPQ9H3M7 391 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 B3GAT2Q9NPZ5 323 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 SIGLEC7Q9Y286 467 aa9.53□□□□□ -0.88
ATG4B-219ENST00000479941 SAMHD1Q9Y3Z3 626 aaKnown RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 HRNRQ86YZ3 2850 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-219ENST00000479941 CSMD1Q96PZ7 3565 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 FAM221AA4D161 298 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 UNC119BA6NIH7 251 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 OR5H1A6NKK0 313 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 A6NNC1 897 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 M0R3G1 203 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 GNGT2O14610 69 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 MAST4O15021 2626 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 KLF4O43474 513 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 FKBP6O75344 327 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 CCNB2O95067 398 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 NDUFB2O95178 105 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 IGHG1P01857 330 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 IGHMP01871 453 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 THBDP07204 575 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 CRYGSP22914 178 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 HOXC12P31275 282 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 CSNK1A1P48729 337 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 CTXN1P60606 82 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 ROR2Q01974 943 aaKnown RBP9.52□□□□□ -0.89
ATG4B-219ENST00000479941 LGALS3BPQ08380 585 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 MELKQ14680 651 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 TAB1Q15750 504 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 STK11Q15831 433 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 MICAQ29983 383 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 C9orf135Q5VTT2 229 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 CARD17Q5XLA6 110 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 LRRC75AQ8NAA5 344 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 GNPDA2Q8TDQ7 276 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 ASB10Q8WXI3 467 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 UTP4Q969X6 686 aaKnown RBP9.52□□□□□ -0.89
ATG4B-219ENST00000479941 MUCL1Q96DR8 90 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 ZC3HAV1LQ96H79 300 aaKnown RBP9.52□□□□□ -0.89
ATG4B-219ENST00000479941 CRLF2Q9HC73 371 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 GPR35Q9HC97 309 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 NGBQ9NPG2 151 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 GLTPQ9NZD2 209 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 U3KQV3 271 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 SPG11Q96JI7 2443 aa9.52□□□□□ -0.89
ATG4B-219ENST00000479941 POLQO75417 2590 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 TEX15Q9BXT5 2789 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 ZNF99A8MXY4 864 aaPredicted RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 CTAG2O75638 210 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 CD14P08571 375 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 PGA4P0DJD7 388 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 PGA3P0DJD8 388 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 NR2C1P13056 603 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 PRF1P14222 555 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 ACADSP16219 412 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 CDH2P19022 906 aaPredicted RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 PAX7P23759 505 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 RPL4P36578 427 aaKnown RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 GSSP48637 474 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 ERFP50548 548 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 CLRN1P58418 232 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 RPL27P61353 136 aaKnown RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 PPP1R8Q12972 351 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms