RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 RAB1CQ92928 201 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 DVL3Q92997 716 aaPredicted RBP13.72□□□□□ -0.21
DDX56-210ENST00000479440 SLC38A4Q969I6 547 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 PPP1R36Q96LQ0 422 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 ULBP2Q9BZM5 246 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 AKTIPQ9H8T0 292 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 SAP30LQ9HAJ7 183 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 SLCO1C1Q9NYB5 712 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 SLC17A7Q9P2U7 560 aa13.72□□□□□ -0.21
DDX56-210ENST00000479440 LOC102725191A0A1B0GVB3 256 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 ENTPD5O75356 428 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 KRT75O95678 551 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 C1QCP02747 245 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 PRG2P13727 222 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 ZFP36P26651 326 aaKnown RBP13.71□□□□□ -0.21
DDX56-210ENST00000479440 EGR4Q05215 589 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 LRRC74AQ0VAA2 488 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 RAB39AQ14964 217 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 MFSD13AQ14CX5 517 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 HFEQ30201 348 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 USP51Q70EK9 711 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 H1FNTQ75WM6 255 aaPredicted RBP13.71□□□□□ -0.21
DDX56-210ENST00000479440 SERPINA11Q86U17 422 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 SYT14Q8NB59 555 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 PNPT1Q8TCS8 783 aaKnown RBP13.71□□□□□ -0.21
DDX56-210ENST00000479440 ST7LQ8TDW4 575 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 SLC25A28Q96A46 364 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 DUX5Q96PT3 197 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 C12orf10Q9HB07 376 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 DECR2Q9NUI1 292 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 ZNF224Q9NZL3 707 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 RPS6KB2Q9UBS0 482 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 NUP50Q9UKX7 468 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 ZNF232Q9UNY5 417 aa13.71□□□□□ -0.21
DDX56-210ENST00000479440 IGLV3-9A0A075B6K5 115 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 BCHEP06276 602 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 RNASE1P07998 156 aaKnown RBP13.7□□□□□ -0.22
DDX56-210ENST00000479440 NQO1P15559 274 aaKnown RBP13.7□□□□□ -0.22
DDX56-210ENST00000479440 GRPRP30550 384 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 ATP4BP51164 291 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 LCN2P80188 198 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 BAMBIQ13145 260 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 MOGQ16653 247 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 COX20Q5RI15 118 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 C6orf89Q6UWU4 347 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 ZNF621Q6ZSS3 439 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 OR6N1Q8NGY5 312 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 SYNPRQ8TBG9 265 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 SLC35B4Q969S0 331 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 ELMOD3Q96FG2 381 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 IFT52Q9Y366 437 aa13.7□□□□□ -0.22
DDX56-210ENST00000479440 TRAV36DV7A0A075B6V5 113 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 PPIAL4EA0A075B759 164 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 PPIAL4CA0A0B4J2A2 164 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 ISPDA4D126 451 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 PPIAL4DF5H284 164 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 FOXH1O75593 365 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 SERPINA5P05154 406 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 FAM157BP0CG42 384 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 PPIAL4FP0DN26 164 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 ZNF250P15622 560 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 RBBP4Q09028 425 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 TUSC1Q2TAM9 212 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 FAM209AQ5JX71 171 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 NET1Q7Z628 596 aaPredicted RBP13.69□□□□□ -0.22
DDX56-210ENST00000479440 WDFY1Q8IWB7 410 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 CLIP4Q8N3C7 705 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 SLC30A7Q8NEW0 376 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 TRIM44Q96DX7 344 aaPredicted RBP13.69□□□□□ -0.22
DDX56-210ENST00000479440 EMC6Q9BV81 110 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 C1QTNF5Q9BXJ0 243 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 C1orf198Q9H425 327 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 CDH20Q9HBT6 801 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 PLEK2Q9NYT0 353 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 TGP01266 2768 aa13.69□□□□□ -0.22
DDX56-210ENST00000479440 PKD1L1Q8TDX9 2849 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 TMEM247A6NEH6 219 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 CLPTM1O96005 669 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 LCKP06239 509 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 GCH1P30793 250 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 CDKN2CP42773 168 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 AQP5P55064 265 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 SLC3A1Q07837 685 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 MAPK11Q15759 364 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 ZNF584Q8IVC4 421 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 CPEB3Q8NE35 698 aaKnown RBP13.68□□□□□ -0.22
DDX56-210ENST00000479440 ZNF519Q8TB69 540 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 TCP10LQ8TDR4 215 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 C11orf40Q8WZ69 217 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 TAAR8Q969N4 342 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 TSPAN32Q96QS1 320 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 ASPNQ9BXN1 380 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 KLHL14Q9P2G3 628 aa13.68□□□□□ -0.22
DDX56-210ENST00000479440 CLDN34H7C241 214 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 BPGMP07738 259 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 MYZAPP0CAP1 466 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 LBPP18428 481 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms