RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 VLDLRP98155 873 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 SPIBQ01892 262 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 PRKCDQ05655 676 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 DGCR6Q14129 220 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 ACKR1Q16570 336 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 TBRG1Q3YBR2 411 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 HIKESHIQ53FT3 197 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 CYP2R1Q6VVX0 501 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 DHFR2Q86XF0 187 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 DEPDC4Q8N2C3 294 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 RADILQ96JH8 1075 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 C7orf34Q96L11 122 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 LRGUKQ96M69 825 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 ZNF347Q96SE7 839 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 TRIM15Q9C019 465 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 LIME1Q9H400 295 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 POFUT2Q9Y2G5 429 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 CSMD2Q7Z408 3487 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 A0A087WUU8 490 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 A0A1W2PPR1 153 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 ZNF99A8MXY4 864 aaPredicted RBP16.82■□□□□ 0.28
SYNE4-202ENST00000340477 PDE5AO76074 875 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 UBOX5O94941 541 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 ATE1O95260 518 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 NR2C1P13056 603 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 HOXB1P14653 301 aaPredicted RBP16.82■□□□□ 0.28
SYNE4-202ENST00000340477 PTAFRP25105 342 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 AQP2P41181 271 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 ART1P52961 327 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 IST1P53990 364 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 CLRN1P58418 232 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 ARF1P84077 181 aaKnown RBP16.82■□□□□ 0.28
SYNE4-202ENST00000340477 TRIM25Q14258 630 aaKnown RBP16.82■□□□□ 0.28
SYNE4-202ENST00000340477 MELKQ14680 651 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 ALG10Q5BKT4 473 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 OAFQ86UD1 273 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 MAGEE2Q8TD90 523 aaPredicted RBP16.82■□□□□ 0.28
SYNE4-202ENST00000340477 PIGTQ969N2 578 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 SLC25A44Q96H78 314 aaPredicted RBP16.82■□□□□ 0.28
SYNE4-202ENST00000340477 BOD1Q96IK1 185 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 CCL19Q99731 98 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 TMEM204Q9BSN7 226 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 CCM2LQ9NUG4 571 aaPredicted RBP16.82■□□□□ 0.28
SYNE4-202ENST00000340477 TAS2R1Q9NYW7 299 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 HIF3AQ9Y2N7 669 aa16.82■□□□□ 0.28
SYNE4-202ENST00000340477 PRR14LQ5THK1 2151 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 A0A096LPE4 126 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 A0A1W2PPZ6 126 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 ABCD4O14678 606 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 HS3ST1O14792 307 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 GYG2O15488 501 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 F13BP05160 661 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 GPR4P46093 362 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 CAPZA2P47755 286 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 LCN8Q6JVE9 175 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 ADAM5Q6NVV9 412 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 PODNL1Q6PEZ8 512 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 SEZ6L2Q6UXD5 910 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 LINGO2Q7L985 606 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 CCDC36Q8IYA8 594 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
SYNE4-202ENST00000340477 WDR31Q8NA23 367 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 SLC7A13Q8TCU3 470 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 NANOS1Q8WY41 292 aaKnown RBP16.81■□□□□ 0.28
SYNE4-202ENST00000340477 AKAP1Q92667 903 aaKnown RBP eCLIP16.81■□□□□ 0.28
SYNE4-202ENST00000340477 BCL2L2Q92843 193 aaPredicted RBP16.81■□□□□ 0.28
SYNE4-202ENST00000340477 FBXW5Q969U6 566 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 CCDC124Q96CT7 223 aaKnown RBP16.81■□□□□ 0.28
SYNE4-202ENST00000340477 ASB9Q96DX5 294 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 KCNS3Q9BQ31 491 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 THTPAQ9BU02 230 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 NPAP1Q9NZP6 1156 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 POU2F3Q9UKI9 436 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 AURKCQ9UQB9 309 aa16.81■□□□□ 0.28
SYNE4-202ENST00000340477 ARPC4-TTLL3A0A0A6YYG9 625 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 DPRXA6NFQ7 191 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 NPIPB13A6NJU9 1138 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 CENPBD1B2RD01 187 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 NPIPB4C9JG80 1138 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 DIRAS1O95057 198 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 GADD45GO95257 159 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 SEMG1P04279 462 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 MAKP20794 623 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 ATP6V1B2P21281 511 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 CDH11P55287 796 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 FAM205BPQ63HN1 556 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 SLC22A25Q6T423 547 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 ZDHHC21Q8IVQ6 265 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 OR52J3Q8NH60 311 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 MOSPD2Q8NHP6 518 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 MBD6Q96DN6 1003 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 SEPHS2Q99611 448 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 C1QTNF6Q9BXI9 259 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 IL1RAPQ9NPH3 570 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 BEX4Q9NWD9 120 aaPredicted RBP16.8■□□□□ 0.28
SYNE4-202ENST00000340477 GLTPQ9NZD2 209 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 TMCC3Q9ULS5 477 aa16.8■□□□□ 0.28
SYNE4-202ENST00000340477 TRAV27A0A087WT01 109 aa16.79■□□□□ 0.28
SYNE4-202ENST00000340477 PLAUP00749 431 aa16.79■□□□□ 0.28
SYNE4-202ENST00000340477 CD40P25942 277 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms