RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 ZNF587Q96SQ5 575 aaPredicted RBP11.44□□□□□ -0.58
UBXN4-201ENST00000272638 LMF2Q9BU23 707 aaKnown RBP11.44□□□□□ -0.58
UBXN4-201ENST00000272638 FKRPQ9H9S5 495 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 NOP16Q9Y3C1 178 aaKnown RBP11.44□□□□□ -0.58
UBXN4-201ENST00000272638 C13orf42A0A1B0GVH6 325 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 EFCAB7A8K855 629 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ARPC5O15511 151 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ADAM11O75078 769 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 NGFRP08138 427 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 DIO1P49895 249 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 LTBQ06643 244 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 FAPQ12884 760 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 SLC18B1Q6NT16 456 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 TMPRSS11FQ6ZWK6 438 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 COQ8AQ8NI60 647 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 NUDT9Q9BW91 350 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 SATB2Q9UPW6 733 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 EMC9Q9Y3B6 208 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 TMEM14AQ9Y6G1 99 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 TP53BP1Q12888 1972 aaPredicted RBP11.44□□□□□ -0.58
UBXN4-201ENST00000272638 TMED7-TICAM2A0A0A6YYA0 188 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ZFPL1O95159 310 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 CD27P26842 260 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 HSD17B7P56937 341 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF85Q03923 595 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 HEPHL1Q6MZM0 1159 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ACBD4Q8NC06 268 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 SLC6A7Q99884 636 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 IFT46Q9NQC8 304 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 COA3Q9Y2R0 106 aaPredicted RBP11.44□□□□□ -0.58
UBXN4-201ENST00000272638 TMED7Q9Y3B3 224 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 FOLR1P15328 257 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ETFDHQ16134 617 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ACKR1Q16570 336 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 C14orf28Q4W4Y0 310 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 OLFML2AQ68BL7 652 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 HDDC2Q7Z4H3 204 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF283Q8N7M2 679 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 BOLLQ8N9W6 283 aaKnown RBP11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ELMOD3Q96FG2 381 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 DHRS1Q96LJ7 313 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 VSX1Q9NZR4 365 aaPredicted RBP11.44□□□□□ -0.58
UBXN4-201ENST00000272638 SUSD2Q9UGT4 822 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 RARRES3Q9UL19 164 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 FRMPD3Q5JV73 1810 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 A0A0A6YYJ9 748 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 TRIM64BA6NI03 449 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 M0R233 179 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 FOXS1O43638 330 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 GLCEO94923 617 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 ANXA7P20073 488 aaKnown RBP11.43□□□□□ -0.58
UBXN4-201ENST00000272638 FGF9P31371 208 aaPredicted RBP11.43□□□□□ -0.58
UBXN4-201ENST00000272638 CLRN1P58418 232 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 WDR45BQ5MNZ6 344 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 SLC35F3Q8IY50 421 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 TMEM234Q8WY98 164 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 PELOQ9BRX2 385 aaKnown RBP11.43□□□□□ -0.58
UBXN4-201ENST00000272638 INPP5EQ9NRR6 644 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 RDH8Q9NYR8 311 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 TMEM221A6NGB7 291 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 VSTM2BA6NLU5 285 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 POU3F3P20264 500 aaPredicted RBP11.43□□□□□ -0.58
UBXN4-201ENST00000272638 NPR2P20594 1047 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 SLC2A5P22732 501 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 CDK10Q15131 360 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 RAET1LQ5VY80 246 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 PAPD4Q6PIY7 484 aaKnown RBP11.43□□□□□ -0.58
UBXN4-201ENST00000272638 FAM180AQ6UWF9 173 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 OR5D18Q8NGL1 313 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 LILRB4Q8NHJ6 448 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 SMIM19Q96E16 107 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 NOX3Q9HBY0 568 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 TMEM269A0A1B0GVZ9 245 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 FITM1A5D6W6 292 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 KDM4BO94953 1096 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 AKR7A3O95154 331 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 AMY2AP04746 511 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 ITGA5P08648 1049 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 EPXP11678 715 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 RBMS1P29558 406 aaKnown RBP11.43□□□□□ -0.58
UBXN4-201ENST00000272638 CXCL12P48061 93 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 RAB11BQ15907 218 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 CDNFQ49AH0 187 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 MDGA2Q7Z553 956 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 TPRA1Q86W33 373 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 EID2Q8N6I1 236 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 OR10AC1Q8NH08 325 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 MSANTD3Q96H12 275 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 ST6GAL2Q96JF0 529 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 ARL6Q9H0F7 186 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 SERINC1Q9NRX5 453 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 RNF215Q9Y6U7 377 aa11.43□□□□□ -0.58
UBXN4-201ENST00000272638 A0A1W2PNR3 127 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 C5orf51A6NDU8 294 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 CT45A8P0DMV1 189 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 CT45A9P0DMV2 189 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 CCNOP22674 350 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 DCTDP32321 178 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 ALKBH1Q13686 389 aaKnown RBP11.42□□□□□ -0.58
UBXN4-201ENST00000272638 CT45A2Q5DJT8 189 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms