RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ADA2Q9NZK5 511 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 ABCD2Q9UBJ2 740 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 CADP27708 2225 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 A0A1W2PR80 420 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 TRAPPC13A5PLN9 417 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 AQP7P3A6NL99 342 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 CPSF4LA6NMK7 179 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 M0R1B8 84 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 CXCR6O00574 342 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 CHP2O43745 196 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 AKR7A3O95154 331 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 CSF3P09919 207 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 IFNA8P32881 189 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 RPS5P46782 204 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 GSK3BP49841 420 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 CDH12P55289 794 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 SELENOWP63302 87 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 EGR4Q05215 589 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 KRT72Q14CN4 511 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 FAM69AQ5T7M9 428 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 C16orf89Q6UX73 402 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 CARM1Q86X55 608 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 ZNF525Q8N782 197 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 TMEM99Q8N816 258 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 MPP4Q96JB8 637 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 WFDC6Q9BQY6 131 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 TMEM43Q9BTV4 400 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 PCDHAC1Q9H158 963 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 RASD1Q9Y272 281 aa15.35■□□□□ 0.05
SHKBP1-203ENST00000594298 STAB1Q9NY15 2570 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 MXRA5Q9NR99 2828 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 PHF1O43189 567 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 BMP4P12644 408 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 EFNA4P52798 201 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 CRYBA2P53672 197 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 FOXG1P55316 489 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 MXRA7P84157 204 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 SLC17A1Q14916 467 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 NPTX1Q15818 432 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 RBM45Q8IUH3 476 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 ADAMTS16Q8TE57 1224 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 C10orf105Q8TEF2 133 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 NANOS1Q8WY41 292 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 FAM168AQ92567 244 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 KTI12Q96EK9 354 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 TPD52L3Q96J77 140 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 FKRPQ9H9S5 495 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 SLC17A5Q9NRA2 495 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 ARL8BQ9NVJ2 186 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 LPAR3Q9UBY5 353 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 AMDHD2Q9Y303 409 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 FLVCR1Q9Y5Y0 555 aa15.34■□□□□ 0.05
SHKBP1-203ENST00000594298 THBS2P35442 1172 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 TGFBR3Q03167 851 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 CHRNB3Q05901 458 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 TTC33Q6PID6 262 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 CASP12Q6UXS9 341 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 LINC00114Q6XXX2 140 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 PGAM4Q8N0Y7 254 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 OR4D11Q8NGI4 311 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 HTRA1Q92743 480 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 TAAR8Q969N4 342 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 FAM162AQ96A26 154 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 BOD1Q96IK1 185 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 NSL1Q96IY1 281 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 KCNK17Q96T54 332 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 PTDSS2Q9BVG9 487 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 SLC7A10Q9NS82 523 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 CORINQ9Y5Q5 1042 aa15.33■□□□□ 0.04
SHKBP1-203ENST00000594298 IGKV1D-42A0A075B6H8 117 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 FTCDNL1E5RQL4 147 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 F12P00748 615 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 THRBP10828 461 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 APOBEC3AP31941 199 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 TAS2R41P59536 307 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 SPATS1Q496A3 300 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 SAMD4BQ5PRF9 694 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 CYB5R2Q6BCY4 276 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 DEF8Q6ZN54 512 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 GPAT4Q86UL3 456 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 FITM2Q8N6M3 262 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 C10orf53Q8N6V4 93 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 OR9K2Q8NGE7 335 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 TMEM45BQ96B21 275 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 SLC41A3Q96GZ6 507 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 C1QTNF6Q9BXI9 259 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 ASPNQ9BXN1 380 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 BEX2Q9BXY8 128 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 SLC19A3Q9BZV2 496 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 UPB1Q9UBR1 384 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 RPS6KA6Q9UK32 745 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 SLC7A7Q9UM01 511 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 ATP23Q9Y6H3 246 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 PMF1-BGLAPU3KQ54 211 aa15.32■□□□□ 0.04
SHKBP1-203ENST00000594298 FZD7O75084 574 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 OR5F1O95221 314 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 ZNF682O95780 498 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 MT-ATP6P00846 226 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 IGHV4-31P0DP07 118 aa15.31■□□□□ 0.04
SHKBP1-203ENST00000594298 USF1P22415 310 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms