RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 OR7A5Q15622 319 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 LRRC36Q1X8D7 754 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 ALG10BQ5I7T1 473 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 FGD3Q5JSP0 725 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 ABLIM2Q6H8Q1 611 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 ZNF770Q6IQ21 691 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-225ENST00000569245 TBPL2Q6SJ96 375 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 Q6ZT83 130 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 ATG4DQ86TL0 474 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-225ENST00000569245 NKAIN4Q8IVV8 208 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 RNF113BQ8IZP6 322 aaKnown RBP12.81□□□□□ -0.36
COMMD4-225ENST00000569245 HS3ST5Q8IZT8 346 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 CBR4Q8N4T8 237 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 OR10G2Q8NGC3 310 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 ACOT11Q8WXI4 607 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-225ENST00000569245 APH1AQ96BI3 265 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 HS6ST2Q96MM7 605 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 SLC29A1Q99808 456 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 RBM4BQ9BQ04 359 aaKnown RBP12.81□□□□□ -0.36
COMMD4-225ENST00000569245 ZNF426Q9BUY5 554 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 RBM4Q9BWF3 364 aaKnown RBP12.81□□□□□ -0.36
COMMD4-225ENST00000569245 TAPBPLQ9BX59 468 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 POTEKPQ9BYX7 375 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 OR10A4Q9H209 315 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 UBTD1Q9HAC8 227 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 USE1Q9NZ43 259 aa12.81□□□□□ -0.36
COMMD4-225ENST00000569245 MAGED1Q9Y5V3 778 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-225ENST00000569245 MAP1AP78559 2803 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-225ENST00000569245 IGKV3D-15A0A087WSY6 115 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 A0A087WUJ7 227 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 A0A087WUU8 490 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 A0A1W2PPR1 153 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 ZNF716A6NP11 495 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 A8MVM7 634 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 H0YJX3 145 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 SOCS2O14508 198 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 EI24O14681 340 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 MRPL33O75394 65 aaKnown RBP12.8□□□□□ -0.36
COMMD4-225ENST00000569245 ATE1O95260 518 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 HPRP00739 348 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 IGHV3-9P01782 118 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 PNMTP11086 282 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 ANXA8P13928 327 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 ALDH3A2P51648 485 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 ITGADQ13349 1161 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 LAPTM4AQ15012 233 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 SEC23BQ15437 767 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 BEX5Q5H9J7 111 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 OTUD3Q5T2D3 398 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-225ENST00000569245 FAHD1Q6P587 224 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 SPNS3Q6ZMD2 512 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 WDR88Q6ZMY6 472 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 MBOAT2Q6ZWT7 520 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 BHLHA15Q7RTS1 189 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-225ENST00000569245 RNF217Q8TC41 542 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 HSD17B8Q92506 261 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 FOXC2Q99958 501 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 VCXQ9H320 206 aa12.8□□□□□ -0.36
COMMD4-225ENST00000569245 ABCA4P78363 2273 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-225ENST00000569245 LIPT2A6NK58 231 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 ELOA3DA6NLF2 546 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-225ENST00000569245 RAMP1O60894 148 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 LYZL6O75951 148 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 AKR7A3O95154 331 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 ALPLP05186 524 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 PRKACGP22612 351 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 CBLP22681 906 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 EDNRAP25101 427 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 H3F3AP84243 136 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 STK11Q15831 433 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 ELOA3BQ3SY89 546 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 C1orf140Q5VVS0 124 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 PAQR6Q6TCH4 344 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 CASP12Q6UXS9 341 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 ZNF730Q6ZMV8 503 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 GPAT4Q86UL3 456 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 ELOA3Q8NG57 546 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 OR4K5Q8NGD3 323 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 TMEM255BQ8WV15 326 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 TMEM239Q8WW34 195 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 PLPPR2Q96GM1 343 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 USB1Q9BQ65 265 aaKnown RBP12.79□□□□□ -0.36
COMMD4-225ENST00000569245 TMEM43Q9BTV4 400 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 SLC19A3Q9BZV2 496 aa12.79□□□□□ -0.36
COMMD4-225ENST00000569245 HTR3EA5X5Y0 456 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 KLF4O43474 513 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 OR10H3O60404 316 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 AHSA1O95433 338 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 CNOT4O95628 575 aaKnown RBP12.78□□□□□ -0.36
COMMD4-225ENST00000569245 IGF2P01344 180 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 IFNGR2P38484 337 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 DAPP51397 102 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 SLC16A1P53985 500 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 UGT2B15P54855 530 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 NR1H2P55055 460 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 FOXD4Q12950 439 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-225ENST00000569245 DEFB113Q30KQ7 82 aa12.78□□□□□ -0.36
COMMD4-225ENST00000569245 FBXW9Q5XUX1 488 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms