RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 TIMM10P62072 90 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 HMGCS1Q01581 520 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 C2orf80Q0P641 193 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 HERPUD1Q15011 391 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 GLYR1Q49A26 553 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM69Q5SWH9 247 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 OR52W1Q6IF63 320 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 FSTL4Q6MZW2 842 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CAPN13Q6MZZ7 669 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CCDC144NLQ6NUI1 221 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF613Q6PF04 617 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 INO80CQ6PI98 192 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF367Q7RTV3 350 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 DEFB128Q7Z7B8 93 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 LSRQ86X29 649 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CBLN2Q8IUK8 224 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CBR4Q8N4T8 237 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 RNF152Q8N8N0 203 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 UCN3Q969E3 161 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 HIST1H2BAQ96A08 127 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ISOC2Q96AB3 205 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 MRAP2Q96G30 205 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 SLC35E1Q96K37 410 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 SIGMAR1Q99720 223 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ARHGDIGQ99819 225 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 REEP2Q9BRK0 252 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 MECRQ9BV79 373 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 OR8D2Q9GZM6 311 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 MAGT1Q9H0U3 335 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 MMP28Q9H239 520 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CPVLQ9H3G5 476 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 GSTO2Q9H4Y5 243 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 NSUN3Q9H649 340 aaKnown RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 MYOZ2Q9NPC6 264 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ONECUT1Q9UBC0 465 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF222Q9UK12 451 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 HHLA2Q9UM44 414 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 AMDHD2Q9Y303 409 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 HS3ST4Q9Y661 456 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ADGRB2O60241 1585 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 KIF1BO60333 1816 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 QRICH2Q9H0J4 1663 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 A0A0A6YYC8 382 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 FAM237BA0A1B0GVD1 139 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 A0A1W2PR48 441 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 I3L1I5 382 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 UPK1AO00322 258 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 OR7A17O14581 309 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 WNT9AO14904 365 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 RAB29O14966 203 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 SLC16A5O15375 505 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 PCDH7O60245 1069 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 KNG1P01042 644 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 MT-ND4P03905 459 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CEACAM1P13688 526 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 PSMA1P25786 263 aaKnown RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 VIPR1P32241 457 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 VIPR2P41587 438 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CTSKP43235 329 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 LGALS7P47929 136 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 LSSP48449 732 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 TAF6P49848 677 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ERVPABLB-1P60509 514 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 PAX2Q02962 417 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 TLE1Q04724 770 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ZFP36L1Q07352 338 aaKnown RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 IRF3Q14653 427 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 PCLAFQ15004 111 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ALKBH6Q3KRA9 238 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ACSM3Q53FZ2 586 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 PDZD11Q5EBL8 140 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ARL13AQ5H913 290 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CTSL3PQ5NE16 218 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 C1orf194Q5T5A4 169 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ZNF585AQ6P3V2 769 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 IL34Q6ZMJ4 242 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 AHSA2Q719I0 299 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 OTOP2Q7RTS6 562 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 OR2W3Q7Z3T1 314 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 WDR5BQ86VZ2 330 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 PTOV1Q86YD1 416 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 LYG1Q8N1E2 194 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 FTMTQ8N4E7 242 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 LRRC57Q8N9N7 239 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 OR4D5Q8NGN0 318 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 C15orf40Q8WUR7 153 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 RERGQ96A58 199 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 DPH2Q9BQC3 489 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-203ENST00000545354 TMEM43Q9BTV4 400 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 OR51E2Q9H255 320 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 CRISPLD1Q9H336 500 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 LYRM4Q9HD34 91 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 TMPRSS4Q9NRS4 437 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 RAD18Q9NS91 495 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 FZD4Q9ULV1 537 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 A4GNTQ9UNA3 340 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 ORC6Q9Y5N6 252 aa4.72□□□□□ -1.65
UBE4A-203ENST00000545354 NWD2Q9ULI1 1742 aa4.71□□□□□ -1.65
UBE4A-203ENST00000545354 A0A1W2PP18 115 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms