RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 NANOS3P60323 173 aaKnown RBP12.28□□□□□ -0.44
GPC1-209ENST00000495100 AKR1C1Q04828 323 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ZNF101Q8IZC7 436 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 MED29Q9NX70 200 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ZNF593O00488 134 aaPredicted RBP12.28□□□□□ -0.44
GPC1-209ENST00000495100 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 UBL4AP11441 157 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ZNF28P17035 718 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 SPINK2P20155 84 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 MTNR1BP49286 362 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 SELENOPP49908 381 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 HSF2Q03933 536 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 CHAF1BQ13112 559 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 KLHL26Q53HC5 615 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ELP2Q6IA86 826 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 Q6ZTK2 550 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 LANCL3Q6ZV70 420 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 SLC22A18ASQ8N1D0 253 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 OR11H4Q8NGC9 324 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 HYLS1Q96M11 299 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 KLHDC2Q9Y2U9 406 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 FRMPD3Q5JV73 1810 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 WDFY3Q8IZQ1 3526 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 PLXNB3Q9ULL4 1909 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 CENPBD1B2RD01 187 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ICOSLGO75144 302 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 RBBP9O75884 186 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 GLI4P10075 376 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ZNF823P16415 610 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ART1P52961 327 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 NRG3P56975 720 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 PITPNAQ00169 270 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 RSPO4Q2I0M5 234 aaPredicted RBP12.28□□□□□ -0.44
GPC1-209ENST00000495100 PXDC1Q5TGL8 231 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ARMC10Q8N2F6 343 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 MAP6Q96JE9 813 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 NT5DC2Q9H857 520 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 DUSP22Q9NRW4 184 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 KLRF1Q9NZS2 232 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 A0A1W2PPL8 197 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 OR5K3A6NET4 321 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 METTL12A8MUP2 240 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 GPR89AB7ZAQ6 455 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 PRAMEF2O60811 474 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 GPR89BP0CG08 455 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 CD1CP29017 333 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 FRKP42685 505 aaPredicted RBP12.27□□□□□ -0.44
GPC1-209ENST00000495100 GPR143P51810 404 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 FMODQ06828 376 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 RPL18Q07020 188 aaKnown RBP12.27□□□□□ -0.44
GPC1-209ENST00000495100 CDK5R1Q15078 307 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 OR7A5Q15622 319 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 GRK1Q15835 563 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 SFRP5Q5T4F7 317 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 FAM69AQ5T7M9 428 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 FAM180AQ6UWF9 173 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 COMMD7Q86VX2 200 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 SDR16C5Q8N3Y7 309 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 TEX19Q8NA77 164 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 ANKRD9Q96BM1 317 aaPredicted RBP12.27□□□□□ -0.44
GPC1-209ENST00000495100 LMAN1LQ9HAT1 526 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 ANKRD10Q9NXR5 420 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 DNAJB12Q9NXW2 375 aaKnown RBP12.27□□□□□ -0.44
GPC1-209ENST00000495100 COPS7AQ9UBW8 275 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 KLHL21Q9UJP4 597 aa12.27□□□□□ -0.44
GPC1-209ENST00000495100 NOP16Q9Y3C1 178 aaKnown RBP12.27□□□□□ -0.44
GPC1-209ENST00000495100 SLC43A1O75387 559 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 CALCBP10092 127 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
GPC1-209ENST00000495100 FGF9P31371 208 aaPredicted RBP12.27□□□□□ -0.45
GPC1-209ENST00000495100 DEFA5Q01523 94 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 PRAMEF20Q5VT98 475 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 FAM198BQ6UWH4 519 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 RELL2Q8NC24 303 aaPredicted RBP12.27□□□□□ -0.45
GPC1-209ENST00000495100 C20orf85Q9H1P6 137 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 CYSLTR2Q9NS75 346 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 VSX1Q9NZR4 365 aaPredicted RBP12.27□□□□□ -0.45
GPC1-209ENST00000495100 PILRAQ9UKJ1 303 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 TRAPPC4Q9Y296 219 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 TMEM184BQ9Y519 407 aaPredicted RBP12.27□□□□□ -0.45
GPC1-209ENST00000495100 EEF1E1-BLOC1S5C9J1V9 151 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 TGFBR3LH3BV60 316 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 CYR61O00622 381 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 UTS2O95399 124 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 SLC6A9P48067 706 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 CLDN20P56880 219 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 TAS2R43P59537 309 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 ARPC4P59998 168 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 ACTC1P68032 377 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 ACTA1P68133 377 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 LTBQ06643 244 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 TMEM255AQ5JRV8 349 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 NPSR1Q6W5P4 371 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 CCDC28AQ8IWP9 274 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 MRPL48Q96GC5 212 aaKnown RBP12.27□□□□□ -0.45
GPC1-209ENST00000495100 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.27□□□□□ -0.45
GPC1-209ENST00000495100 ELF5Q9UKW6 265 aaPredicted RBP12.27□□□□□ -0.45
GPC1-209ENST00000495100 POLHQ9Y253 713 aa12.27□□□□□ -0.45
GPC1-209ENST00000495100 BDP1A6H8Y1 2624 aa12.26□□□□□ -0.45
GPC1-209ENST00000495100 A0A0B4J2E0 115 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms