RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 UBE2NP61088 152 aaKnown RBP9.24□□□□□ -0.93
NELFE-213ENST00000494956 CYLC2Q14093 348 aaPredicted RBP9.24□□□□□ -0.93
NELFE-213ENST00000494956 MELKQ14680 651 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 MST1LQ2TV78 715 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 ANKRD16Q6P6B7 361 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 ZNF613Q6PF04 617 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 VHLLQ6RSH7 139 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 C5orf46Q6UWT4 87 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 DEF8Q6ZN54 512 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 PATL1Q86TB9 770 aaKnown RBP9.24□□□□□ -0.93
NELFE-213ENST00000494956 CARM1Q86X55 608 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 FBXL14Q8N1E6 418 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 GPR137CQ8N3F9 429 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 BHLHE22Q8NFJ8 381 aaPredicted RBP9.24□□□□□ -0.93
NELFE-213ENST00000494956 RCN3Q96D15 328 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 HS6ST2Q96MM7 605 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 EPYCQ99645 322 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 ECSITQ9BQ95 431 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 PRSS27Q9BQR3 290 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 TMEM43Q9BTV4 400 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 ASPNQ9BXN1 380 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 REG4Q9BYZ8 158 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 NOX3Q9HBY0 568 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 FAIMQ9NVQ4 179 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 RCE1Q9Y256 329 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 SH3GLB1Q9Y371 365 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
NELFE-213ENST00000494956 YLPM1P49750 1951 aaKnown RBP9.24□□□□□ -0.93
NELFE-213ENST00000494956 IGHV4-30-2A0A087WSY4 118 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 ARPC4-TTLL3A0A0A6YYG9 625 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 TRAPPC13A5PLN9 417 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 RPL36A-HNRNPH2H7BZ11 118 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 GPRIN2O60269 458 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 PIP5K1CO60331 668 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 FMO6PO60774 539 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 C8BP07358 591 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 CAPZA2P47755 286 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 IDH3GP51553 393 aaPredicted RBP9.23□□□□□ -0.93
NELFE-213ENST00000494956 UGT2B15P54855 530 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 BIDP55957 195 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 NAAAQ02083 359 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 PUDPQ08623 228 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 NPRL3Q12980 569 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 ZNF74Q16587 644 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 TUSC1Q2TAM9 212 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 LRRC23Q53EV4 343 aaPredicted RBP9.23□□□□□ -0.93
NELFE-213ENST00000494956 TTC33Q6PID6 262 aaPredicted RBP9.23□□□□□ -0.93
NELFE-213ENST00000494956 DNM1P46Q6ZS02 220 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 CCDC80Q76M96 950 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 SSX8Q7RTT4 187 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 SLC46A3Q7Z3Q1 461 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 NKAIN4Q8IVV8 208 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 C20orf196Q8IYI0 205 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 ZNF525Q8N782 197 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 ADPRHL1Q8NDY3 354 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 OR8J3Q8NGG0 315 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 OR5J2Q8NH18 312 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 OR6S1Q8NH40 331 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 PFN4Q8NHR9 129 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 TMEM255BQ8WV15 326 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 FBXO17Q96EF6 278 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 BOD1Q96IK1 185 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 FKRPQ9H9S5 495 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 MEPEQ9NQ76 525 aaPredicted RBP9.23□□□□□ -0.93
NELFE-213ENST00000494956 MRPL39Q9NYK5 338 aaKnown RBP9.23□□□□□ -0.93
NELFE-213ENST00000494956 TAS2R5Q9NYW4 299 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 CAPN7Q9Y6W3 813 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 NIPBLQ6KC79 2804 aaeCLIP9.23□□□□□ -0.93
NELFE-213ENST00000494956 NAV3Q8IVL0 2385 aa9.23□□□□□ -0.93
NELFE-213ENST00000494956 CHD3Q12873 2000 aaKnown RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 ABCA2Q9BZC7 2435 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 LOC102725191A0A1B0GVB3 256 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 ZNF99A8MXY4 864 aaPredicted RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 IGLV1-44P01699 117 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 HLA-HP01893 362 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 PATE4P0C8F1 98 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 UMPSP11172 480 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 IFNGR1P15260 489 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 B4GALT1P15291 398 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 FUT1P19526 365 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 APOBEC3AP31941 199 aaPredicted RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 MDH1P40925 334 aaKnown RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 NUDT6P53370 316 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 PIGFQ07326 219 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 PIN1Q13526 163 aaPredicted RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 MFSD13AQ14CX5 517 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 INTS11Q5TA45 600 aaKnown RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 MDP1Q86V88 176 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 MEX3DQ86XN8 651 aaKnown RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 TREML1Q86YW5 311 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 SLC30A8Q8IWU4 369 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 SCAIQ8N9R8 606 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 PIK3C3Q8NEB9 887 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 FGFBP3Q8TAT2 258 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 NANOS1Q8WY41 292 aaKnown RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 PROX1Q92786 737 aa9.22□□□□□ -0.93
NELFE-213ENST00000494956 ZNF317Q96PQ6 595 aaPredicted RBP9.22□□□□□ -0.93
NELFE-213ENST00000494956 GRIP2Q9C0E4 1043 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms