RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
NIN-208ENST00000463419 PCGF2P35227 344 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 GZMMP51124 257 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 NUDT6P53370 316 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
NIN-208ENST00000463419 ARF1P84077 181 aaKnown RBP11.3□□□□□ -0.6
NIN-208ENST00000463419 SF3A3Q12874 501 aaKnown RBP eCLIP11.3□□□□□ -0.6
NIN-208ENST00000463419 MFSD13AQ14CX5 517 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 RAB35Q15286 201 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 ENTPD8Q5MY95 495 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 PHYHD1Q5SRE7 291 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 CGB2Q6NT52 195 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 ZNF613Q6PF04 617 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 RBM45Q8IUH3 476 aaKnown RBP11.3□□□□□ -0.6
NIN-208ENST00000463419 WDFY1Q8IWB7 410 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 UEVLDQ8IX04 471 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 TMEM123Q8N131 208 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 GPR137CQ8N3F9 429 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 SCAIQ8N9R8 606 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 PIK3C3Q8NEB9 887 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 OR4D11Q8NGI4 311 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 OR6T1Q8NGN1 323 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 VANGL1Q8TAA9 524 aaPredicted RBP11.3□□□□□ -0.6
NIN-208ENST00000463419 NANOS1Q8WY41 292 aaKnown RBP11.3□□□□□ -0.6
NIN-208ENST00000463419 ZNF317Q96PQ6 595 aaPredicted RBP11.3□□□□□ -0.6
NIN-208ENST00000463419 EMC6Q9BV81 110 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 ASPNQ9BXN1 380 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 CRNNQ9UBG3 495 aaPredicted RBP11.3□□□□□ -0.6
NIN-208ENST00000463419 CORINQ9Y5Q5 1042 aa11.3□□□□□ -0.6
NIN-208ENST00000463419 CPSF4LA6NMK7 179 aaKnown RBP11.29□□□□□ -0.6
NIN-208ENST00000463419 H7C417 338 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 CHP2O43745 196 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 LYPD3O95274 346 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 THY1P04216 161 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 ROS1P08922 2347 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 CECR9P0C854 216 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 PAX7P23759 505 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 CRYBA2P53672 197 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 POU3F1Q03052 451 aaPredicted RBP11.29□□□□□ -0.6
NIN-208ENST00000463419 PMS2P3Q13401 168 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 VMACQ2NL98 169 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 CEACAM16Q2WEN9 425 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 TRMT5Q32P41 509 aaKnown RBP11.29□□□□□ -0.6
NIN-208ENST00000463419 RABL3Q5HYI8 236 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 CARD17Q5XLA6 110 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 NANOGP8Q6NSW7 305 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 NHLRC1Q6VVB1 395 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 WDR88Q6ZMY6 472 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 PATL1Q86TB9 770 aaKnown RBP11.29□□□□□ -0.6
NIN-208ENST00000463419 TSPYL5Q86VY4 417 aaPredicted RBP11.29□□□□□ -0.6
NIN-208ENST00000463419 SLC30A8Q8IWU4 369 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 SVOPQ8N4V2 548 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 C10orf53Q8N6V4 93 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 TAMM41Q96BW9 452 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 TXNDC15Q96J42 360 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 CITED4Q96RK1 184 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 KATNB1Q9BVA0 655 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 NANOGQ9H9S0 305 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 SEC61A2Q9H9S3 476 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 FGFR1OP2Q9NVK5 253 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 ZNF446Q9NWS9 450 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 MED29Q9NX70 200 aa11.29□□□□□ -0.6
NIN-208ENST00000463419 MRPL39Q9NYK5 338 aaKnown RBP11.29□□□□□ -0.6
NIN-208ENST00000463419 IGHV4-30-2A0A087WSY4 118 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 SLC35F4A4IF30 521 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 ZNF503-AS2A6NEH8 195 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 M0R3G1 203 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 FXYD1O00168 92 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 PLPP3O14495 311 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 AKAP8O43823 692 aaKnown RBP11.28□□□□□ -0.6
NIN-208ENST00000463419 SEC14L2O76054 403 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 IGKV3-15P01624 115 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 IGLV1-44P01699 117 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 CRYAAP02489 173 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
NIN-208ENST00000463419 ARFIP2P53365 341 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 PPP2R2BQ00005 443 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 NAAAQ02083 359 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 CHRNB3Q05901 458 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 PUDPQ08623 228 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 KLF10Q13118 480 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 CYLC2Q14093 348 aaPredicted RBP11.28□□□□□ -0.6
NIN-208ENST00000463419 MST1LQ2TV78 715 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 C3orf36Q3SXR2 165 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 INTS11Q5TA45 600 aaKnown RBP11.28□□□□□ -0.6
NIN-208ENST00000463419 MYPOPQ86VE0 399 aaPredicted RBP11.28□□□□□ -0.6
NIN-208ENST00000463419 C20orf196Q8IYI0 205 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 OR10H5Q8NGA6 315 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 SLC26A7Q8TE54 656 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 ADAMTS16Q8TE57 1224 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 FBXO17Q96EF6 278 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 KCNS3Q9BQ31 491 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 RHNO1Q9BSD3 238 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 NOX1Q9Y5S8 564 aa11.28□□□□□ -0.6
NIN-208ENST00000463419 ZNF99A8MXY4 864 aaPredicted RBP11.27□□□□□ -0.61
NIN-208ENST00000463419 MT-ATP6P00846 226 aa11.27□□□□□ -0.61
NIN-208ENST00000463419 CELA3BP08861 270 aa11.27□□□□□ -0.61
NIN-208ENST00000463419 CBR1P16152 277 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms