RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CT83Q5H943 113 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 AVPI1Q5T686 147 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM42Q69YG0 159 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TAPT1Q6NXT6 567 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ACSM6Q6P461 480 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 PODNL1Q6PEZ8 512 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 UNQ9370/PRO34162Q6UXP9 181 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM182Q6ZP80 229 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ZNF572Q7Z3I7 529 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ERASQ7Z444 233 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CTU1Q7Z7A3 348 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SERPINA9Q86WD7 417 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TRAPPC5Q8IUR0 188 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 RIMKLAQ8IXN7 391 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 DAW1Q8N136 415 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SYS1Q8N2H4 156 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 LCORLQ8N3X6 602 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CPXM2Q8N436 756 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 MMGT1Q8N4V1 131 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 DHRSXQ8N5I4 330 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 B3GNT7Q8NFL0 401 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TSPAN14Q8NG11 270 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR5L2Q8NGL0 311 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR9G4Q8NGQ1 327 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR1K1Q8NGR3 316 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR10X1Q8NGY0 326 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR8U1Q8NH10 309 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR5AK3PQ8NH89 298 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM163Q8TC26 289 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 M1APQ8TC57 530 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 GPR151Q8TDV0 419 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 PHF10Q8WUB8 498 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 DEDD2Q8WXF8 326 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ATG4AQ8WYN0 398 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 FCGR1BQ92637 280 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CREB3L1Q96BA8 519 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 NTNG2Q96CW9 530 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 BPIFA2Q96DR5 249 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 MYEOVQ96EZ4 313 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CPNE2Q96FN4 548 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 WBP1Q96G27 269 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 HSFY1Q96LI6 401 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ACCSQ96QU6 501 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 NODALQ96S42 347 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 DCLRE1CQ96SD1 692 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SORT1Q99523 831 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SDHCQ99643 169 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SYT11Q9BT88 431 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SPATA5L1Q9BVQ7 753 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 RBM24Q9BX46 236 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 DPH1Q9BZG8 443 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SIRPDQ9H106 197 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CLMPQ9H6B4 373 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 RNF122Q9H9V4 155 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 CACYBPQ9HB71 228 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 AKIP1Q9NQ31 210 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 PIGVQ9NUD9 493 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 C2orf42Q9NWW7 574 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 MED11Q9P086 117 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 RCC2Q9P258 522 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 DKK2Q9UBU2 259 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ZNF391Q9UJN7 358 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 NXT1Q9UKK6 140 aaKnown RBP4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 EMCNQ9ULC0 261 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 ICAM5Q9UMF0 924 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 SNX12Q9UMY4 172 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 NME7Q9Y5B8 376 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 COX11Q9Y6N1 276 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 MYH11P35749 1972 aa4.29□□□□□ -1.72
HMGB3P9-201ENST00000441799 RGPD8O14715 1765 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 NFAT5O94916 1531 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 LOC105369274A0A096LPK9 316 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 LOC102723532A0A0G2JNH3 316 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 GLTPD2A6NH11 291 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 ANKRD63C9JTQ0 380 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 J3QRK9 145 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 SYNGR3O43761 229 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 PAGE4O60829 102 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 AP2A2O94973 939 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 PAPSS2O95340 614 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 CST1P01037 141 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 PDYNP01213 254 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 THY1P04216 161 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 GYPCP04921 128 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 DCNP07585 359 aaKnown RBP4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 BPGMP07738 259 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR8U9P0C7N5 309 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 ARSBP15848 533 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 IGFBP2P18065 325 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 MATN1P21941 496 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 MMP11P24347 488 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 MGAT1P26572 445 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 KLRK1P26718 216 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 RBMS1P29558 406 aaKnown RBP4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 RBM34P42696 430 aaKnown RBP4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 PTGFRP43088 359 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 SOX2P48431 317 aa4.28□□□□□ -1.72
HMGB3P9-201ENST00000441799 METAP2P50579 478 aaKnown RBP eCLIP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms