RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CELA3BP08861 270 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 DAOP14920 347 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 GIFP27352 417 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 CAPZA2P47755 286 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 NCALDP61601 193 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 NPRL3Q12980 569 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 MS4A18Q3C1V0 323 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 SPATA21Q7Z572 469 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 MDP1Q86V88 176 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 FUNDC1Q8IVP5 155 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 SCAIQ8N9R8 606 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 RNF217Q8TC41 542 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 SPDL1Q96EA4 605 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 SLC41A3Q96GZ6 507 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 C7orf26Q96N11 449 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 ZNF607Q96SK3 696 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 TMEM38AQ9H6F2 299 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 EVA1AQ9H8M9 152 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 B3GAT2Q9NPZ5 323 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 SLAMF8Q9P0V8 285 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 KLHL14Q9P2G3 628 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 SLC13A4Q9UKG4 626 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 CORO2BQ9UQ03 480 aa17.96■□□□□ 0.47
CPNE1-219ENST00000440240 EVPLLA8MZ36 301 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 M0R3G1 203 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 TPST1O60507 370 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 ERLIN1O75477 346 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 CBLP22681 906 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 SLC6A2P23975 617 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 DAG1Q14118 895 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 MYPOPQ86VE0 399 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-219ENST00000440240 SNX32Q86XE0 403 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 MSRB3Q8IXL7 192 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 C20orf196Q8IYI0 205 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 SVOPLQ8N434 492 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 ASPNQ9BXN1 380 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 DYNLRB1Q9NP97 96 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 CCDC167Q9P0B6 97 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 CMAHPQ9Y471 501 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 SPEF1Q9Y4P9 236 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 NOX1Q9Y5S8 564 aa17.95■□□□□ 0.46
CPNE1-219ENST00000440240 TMEM129A0AVI4 362 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 SH3PXD2BA1X283 911 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 ZNF726A6NNF4 738 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 GPX2P18283 190 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 IDH3AP50213 366 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 RGS8P57771 180 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-219ENST00000440240 SCARB2Q14108 478 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 SQLEQ14534 574 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 OR1Q1Q15612 314 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 GLIPR1L2Q4G1C9 344 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 ZNF627Q7L945 461 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 COMTD1Q86VU5 262 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 ZNF786Q8N393 782 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 HPS1Q92902 700 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 CCDC28BQ9BUN5 200 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 B3GNT2Q9NY97 397 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 VAPAQ9P0L0 249 aa17.94■□□□□ 0.46
CPNE1-219ENST00000440240 A0A0B4J2E0 115 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 A0A1B0GX12 115 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 ZNF503-AS2A6NEH8 195 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 HPRP00739 348 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 HLA-DOBP13765 273 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 NR4A1P22736 598 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 EVX1P49640 407 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 CHN2P52757 468 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 POU3F1Q03052 451 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-219ENST00000440240 PMS2P3Q13401 168 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 SNTB2Q13425 540 aaKnown RBP17.93■□□□□ 0.46
CPNE1-219ENST00000440240 ADRM1Q16186 407 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 GSG1Q2KHT4 349 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 KRTAP24-1Q3LI83 254 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 PAGE3Q5JUK9 113 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 PHYHD1Q5SRE7 291 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 SWT1Q5T5J6 900 aaKnown RBP17.93■□□□□ 0.46
CPNE1-219ENST00000440240 CARD17Q5XLA6 110 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 UGT2A3Q6UWM9 527 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 ZCCHC24Q8N2G6 241 aaKnown RBP17.93■□□□□ 0.46
CPNE1-219ENST00000440240 C10orf111Q8N326 155 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 CKAP2Q8WWK9 683 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 EMC6Q9BV81 110 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 DENND2DQ9H6A0 471 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-219ENST00000440240 NOX3Q9HBY0 568 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 SLC52A3Q9NQ40 469 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 MRPL39Q9NYK5 338 aaKnown RBP17.93■□□□□ 0.46
CPNE1-219ENST00000440240 POFUT2Q9Y2G5 429 aa17.93■□□□□ 0.46
CPNE1-219ENST00000440240 SEC14L2O76054 403 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 HLA-HP01893 362 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 BGLAPP02818 100 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 ADRA2AP08913 450 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 TACSTD2P09758 323 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 CD79AP11912 226 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 PUDPQ08623 228 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 KRT80Q6KB66 452 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 NHLRC1Q6VVB1 395 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 ZNF813Q6ZN06 617 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 IL17RELQ6ZVW7 336 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 PXKQ7Z7A4 578 aa17.92■□□□□ 0.46
CPNE1-219ENST00000440240 RANBP3LQ86VV4 465 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-219ENST00000440240 ARMC8Q8IUR7 673 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms