RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 NDUFB11Q9NX14 153 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 LRFN1Q9P244 771 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 MOKQ9UQ07 419 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 B3GALT5Q9Y2C3 310 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 HDGFL3Q9Y3E1 203 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 A0A1W2PRG6 482 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 DAPL1A0PJW8 107 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 GLCEO94923 617 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 CPEP16870 476 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 ACSM1Q08AH1 577 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 GALEQ14376 348 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 GLYR1Q49A26 553 aaPredicted RBP16.32■□□□□ 0.2
VIM-201ENST00000224237 EXD3Q8N9H8 876 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 OR51L1Q8NGJ5 315 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 OR6K6Q8NGW6 343 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 OR51E2Q9H255 320 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 RPH3AQ9Y2J0 694 aaPredicted RBP16.32■□□□□ 0.2
VIM-201ENST00000224237 MED13Q9UHV7 2174 aa16.32■□□□□ 0.2
VIM-201ENST00000224237 CNTRLQ7Z7A1 2325 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 SPTBN2O15020 2390 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 NPIPB13A6NJU9 1138 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 NPIPB4C9JG80 1138 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 ARHGEF9O43307 516 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 AKAP8O43823 692 aaKnown RBP16.31■□□□□ 0.2
VIM-201ENST00000224237 F10P00742 488 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 PSMA1P25786 263 aaKnown RBP16.31■□□□□ 0.2
VIM-201ENST00000224237 ACVR1BP36896 505 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 FOXK1P85037 733 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 LIPKQ5VXJ0 399 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 RAET1LQ5VY80 246 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 ZNF322Q6U7Q0 402 aaPredicted RBP16.31■□□□□ 0.2
VIM-201ENST00000224237 CROCCP3Q8IVE0 287 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 PHC2Q8IXK0 858 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 ADPRHL1Q8NDY3 354 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 OR2T4Q8NH00 348 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 ZNF519Q8TB69 540 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 TM9SF4Q92544 642 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 OR5B2Q96R09 309 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 TBX5Q99593 518 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 UTP23Q9BRU9 249 aaKnown RBP16.31■□□□□ 0.2
VIM-201ENST00000224237 FANCFQ9NPI8 374 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 MS4A18H0YCH9 400 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 ZIC3O60481 467 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 SRD5A2P31213 254 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 CD96P40200 585 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 CD79BP40259 229 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 MS4A18Q3C1V0 323 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 LINC01590Q5TEZ4 76 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 NDNFQ8TB73 568 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 SPRYD4Q8WW59 207 aaPredicted RBP16.31■□□□□ 0.2
VIM-201ENST00000224237 UFD1Q92890 307 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 C5orf34Q96MH7 638 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 UBL7Q96S82 380 aaPredicted RBP16.31■□□□□ 0.2
VIM-201ENST00000224237 ALG12Q9BV10 488 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 CDV3Q9UKY7 258 aaKnown RBP16.31■□□□□ 0.2
VIM-201ENST00000224237 NOX1Q9Y5S8 564 aa16.31■□□□□ 0.2
VIM-201ENST00000224237 AKAP13Q12802 2813 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 DCHS1Q96JQ0 3298 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 A0A0G2JMM0 328 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 LOC100506127A0A0U1RQW1 187 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 A0A1W2PNV4 684 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 A0A1W2PPB8 328 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 A0A1W2PRS3 328 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 KIR3DP1A8MWS1 328 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 H7C1C5 153 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 CDK2AP1O14519 115 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 OR2T7P0C7T2 308 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 DAP3P51398 398 aaKnown RBP16.3■□□□□ 0.2
VIM-201ENST00000224237 RRADP55042 308 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 LCN6P62502 163 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 BDH1Q02338 343 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 TPBGQ13641 420 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 TUBA3EQ6PEY2 450 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 GDPGP1Q6ZNW5 385 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 OR2T27Q8NH04 317 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 ZNRF4Q8WWF5 429 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 THAP4Q8WY91 577 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 ZHX1-C8orf76Q96EF9 292 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 PIGQQ9BRB3 760 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 CHCHD6Q9BRQ6 235 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 SYT4Q9H2B2 425 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 PLGRKTQ9HBL7 147 aa16.3■□□□□ 0.2
VIM-201ENST00000224237 A0A1W2PNR3 127 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 PRSS37A4D1T9 235 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 NEURL1O76050 574 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 AKR7A3O95154 331 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 CNR1P21554 472 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 SFTPDP35247 375 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 CAPZA2P47755 286 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 CAMK2BQ13554 666 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 TMEM176BQ3YBM2 270 aaPredicted RBP16.29■□□□□ 0.2
VIM-201ENST00000224237 SPINK14Q6IE38 97 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 PXKQ7Z7A4 578 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 TSSK2Q96PF2 358 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 TRAPPC4Q9Y296 219 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 MED12Q93074 2177 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 A0A1W2PQL4 384 aaPredicted RBP16.29■□□□□ 0.2
VIM-201ENST00000224237 OR2M5A3KFT3 312 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 LRRC3CA6NJW4 275 aa16.29■□□□□ 0.2
VIM-201ENST00000224237 NPIPA5E9PKD4 350 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms