RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CDC73Q6P1J9 531 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 FKBP9P1Q75LS8 142 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 GPR141Q7Z602 305 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 GALNT5Q7Z7M9 940 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 CALHM3Q86XJ0 350 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 ZNF433Q8N7K0 673 aaPredicted RBP6.88□□□□□ -1.31
CLK1-215ENST00000621181 FAM86B1Q8N7N1 296 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 CDS1Q92903 461 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 C3orf49Q96BT1 292 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 NSMCE2Q96MF7 247 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 TSSK3Q96PN8 268 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 OCSTAMPQ9BR26 566 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 DUSP22Q9NRW4 184 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 ACSS1Q9NUB1 689 aaPredicted RBP6.88□□□□□ -1.31
CLK1-215ENST00000621181 SLC25A37Q9NYZ2 338 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 EMC3Q9P0I2 261 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 VAPAQ9P0L0 249 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 ING1Q9UK53 422 aaPredicted RBP6.88□□□□□ -1.31
CLK1-215ENST00000621181 NPIPA5A0A0B4J1W7 369 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 ZNF724A8MTY0 619 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 NPIPA7E9PJI5 369 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 NPIPB8E9PQR5 432 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 H3BMQ9 156 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 SMAD9O15198 467 aaKnown RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 KIAA0513O60268 411 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 HPRP00739 348 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 MT-ND1P03886 318 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 HMGN2P05204 90 aaKnown RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 NPIPA8P0DM63 369 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 RAP2AP10114 183 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 EFNA1P20827 205 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 ALDH3A2P51648 485 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 MTPNP58546 118 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 PHC1P78364 1004 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 CHRNB3Q05901 458 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 RAB39AQ14964 217 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 KLHL26Q53HC5 615 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 RUNDC3AQ59EK9 446 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 FBXW9Q5XUX1 488 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 XAF1Q6GPH4 301 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 ZNF544Q6NX49 715 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 ZNF773Q6PK81 442 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 CLVS1Q8IUQ0 354 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 OFCC1Q8IZS5 231 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 TOR1AIP2Q8NFQ8 470 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 OR13F1Q8NGS4 319 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 CLHC1Q8NHS4 586 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 PNPT1Q8TCS8 783 aaKnown RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 MAGEE2Q8TD90 523 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 GPR119Q8TDV5 335 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 CYGBQ8WWM9 190 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 APH1AQ96BI3 265 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 ZNF764Q96H86 408 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 METTL2AQ96IZ6 378 aaKnown RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 PPP3R2Q96LZ3 170 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 COG8Q96MW5 612 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 RDH12Q96NR8 316 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 STACQ99469 402 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 HOXD1Q9GZZ0 328 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 REEP4Q9H6H4 257 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 FKRPQ9H9S5 495 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 ASB6Q9NWX5 421 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 C1orf109Q9NX04 203 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 TAS2R16Q9NYV7 291 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 USE1Q9NZ43 259 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 PMF1-BGLAPU3KQ54 211 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 NUP214P35658 2090 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 ARFGEF3Q5TH69 2177 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 ANK3Q12955 4377 aaKnown RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 SLC35F4A4IF30 521 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 SULT2B1O00204 365 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 OIP5O43482 229 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 DEAF1O75398 565 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 SEC14L2O76054 403 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 APEHP13798 732 aaKnown RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 SDC1P18827 310 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 FRKP42685 505 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 DIO1P49895 249 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 CSNK2A1P68400 391 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 TP53BP2Q13625 1128 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 CBFBQ13951 182 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 QPRTQ15274 297 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 LRRC23Q53EV4 343 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 DCST2Q5T1A1 773 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLK1-215ENST00000621181 OR7E24Q6IFN5 339 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 B3GLCTQ6Y288 498 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 KCTD8Q6ZWB6 473 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 GLB1L3Q8NCI6 653 aaPredicted RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 OR5W2Q8NH69 310 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 FBLIM1Q8WUP2 373 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 MSI2Q96DH6 328 aaKnown RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 FAM120BQ96EK7 910 aaKnown RBP6.87□□□□□ -1.31
CLK1-215ENST00000621181 MUS81Q96NY9 551 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 MBOAT4Q96T53 435 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 SEPHS2Q99611 448 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 PIMREGQ9BSJ6 248 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 OSBPL10Q9BXB5 764 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 C1QTNF6Q9BXI9 259 aa6.87□□□□□ -1.31
CLK1-215ENST00000621181 PIGUQ9H490 435 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms