RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 DMKNQ6E0U4 476 aaPredicted RBP9.42□□□□□ -0.9
VPS25-203ENST00000589520 OPN5Q6U736 354 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 LYPD8Q6UX82 237 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 TRILQ7L0X0 811 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 MARCH9Q86YJ5 346 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 CENPSQ8N2Z9 138 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 EXD3Q8N9H8 876 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 OR2Y1Q8NGV0 311 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 NEIL3Q8TAT5 605 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 TMEM203Q969S6 136 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 SPACA9Q96E40 222 aaPredicted RBP9.42□□□□□ -0.9
VPS25-203ENST00000589520 C4orf36Q96KX1 117 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 Q96M85 177 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 MOGAT1Q96PD6 335 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 TIMP4Q99727 224 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 ALG12Q9BV10 488 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 RTN4RQ9BZR6 473 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 ARRDC1-AS1Q9H2J1 176 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 OCEL1Q9H607 264 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 PTGES2Q9H7Z7 377 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 SP140LQ9H930 580 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 ISG20L2Q9H9L3 353 aaKnown RBP9.42□□□□□ -0.9
VPS25-203ENST00000589520 FANCFQ9NPI8 374 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 KLHL1Q9NR64 748 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 KLRF1Q9NZS2 232 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 PPP4R1LQ9P1A2 415 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 ZNF346Q9UL40 294 aaKnown RBP9.42□□□□□ -0.9
VPS25-203ENST00000589520 YARS2Q9Y2Z4 477 aaKnown RBP9.42□□□□□ -0.9
VPS25-203ENST00000589520 CMAHPQ9Y471 501 aa9.42□□□□□ -0.9
VPS25-203ENST00000589520 SEC16AO15027 2179 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 ADAMTS20P59510 1910 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 GVINP1Q7Z2Y8 2422 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 A0A087WZY1 265 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 IGHV1-45A0A0A0MS14 117 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 A0A1W2PRG6 482 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 ANKRD61A6NGH8 418 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 FZD7O75084 574 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 ARL6IP5O75915 188 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 LALBAP00709 142 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 PRKCAP17252 672 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 CRABP1P29762 137 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 AVPR2P30518 371 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TNFSF8P32971 234 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 FOLR3P41439 243 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 CDKN2AP42771 156 aaKnown RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 ZNF41P51814 821 aaPredicted RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 RPL27P61353 136 aaKnown RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 PPP3R1P63098 170 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 SIRPAP78324 504 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 EGR3Q06889 387 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 HNRNPA0Q13151 305 aaKnown RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 EIF3IQ13347 325 aaKnown RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 ATP1A4Q13733 1029 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TOMM34Q15785 309 aaPredicted RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 LINC01590Q5TEZ4 76 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 EEF1A1P5Q5VTE0 462 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 DESI1Q6ICB0 168 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 FAM198BQ6UWH4 519 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 NDUFAF7Q7L592 441 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 ZBTB46Q86UZ6 589 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 LSM14AQ8ND56 463 aaKnown RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 OR2I1PQ8NGU4 316 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 ABHD4Q8TB40 342 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 SETD6Q8TBK2 473 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 THRSPQ92748 146 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 ZMYND19Q96E35 227 aaPredicted RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 TRMT61AQ96FX7 289 aaKnown RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 IMMP1LQ96LU5 166 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TSPAN32Q96QS1 320 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TAAR9Q96RI9 348 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TBX5Q99593 518 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 CDC6Q99741 560 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TM9SF2Q99805 663 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 KCNS3Q9BQ31 491 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 PTDSS2Q9BVG9 487 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TMED9Q9BVK6 235 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 DDA1Q9BW61 102 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 HDHD5Q9BXW7 423 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 ULBP3Q9BZM4 244 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TXNIPQ9H3M7 391 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 METTL7AQ9H8H3 244 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 MARCH7Q9H992 704 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 TAS2R5Q9NYW4 299 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 VSX1Q9NZR4 365 aaPredicted RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 DAPK2Q9UIK4 370 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 PADI1Q9ULC6 663 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 B3GALT5Q9Y2C3 310 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 PTRH2Q9Y3E5 179 aaKnown RBP9.41□□□□□ -0.9
VPS25-203ENST00000589520 ADAM18Q9Y3Q7 739 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 B3GALT1Q9Y5Z6 326 aa9.41□□□□□ -0.9
VPS25-203ENST00000589520 RP1P56715 2156 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 PI4KAP42356 2102 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 TRAV1-2A0A0B4J238 106 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 ZC3H12DA2A288 527 aaKnown RBP9.4□□□□□ -0.9
VPS25-203ENST00000589520 PLPP3O14495 311 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 CTDSP2O14595 271 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 ADAM10O14672 748 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 RGS5O15539 181 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 SLC19A2O60779 497 aa9.4□□□□□ -0.9
VPS25-203ENST00000589520 KLF7O75840 302 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms