RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ANGPT4Q9Y264 503 aa11.01□□□□□ -0.65
HSPG2-212ENST00000493940 B3GALT5Q9Y2C3 310 aa11.01□□□□□ -0.65
HSPG2-212ENST00000493940 JMJD1CQ15652 2540 aa11.01□□□□□ -0.65
HSPG2-212ENST00000493940 IGHV1-18A0A0C4DH31 117 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 PRORSD1PA6NEY8 169 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 SERPINB7O75635 380 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 VIMP08670 466 aaKnown RBP11□□□□□ -0.65
HSPG2-212ENST00000493940 PTAFRP25105 342 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 PCGF2P35227 344 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 ROR2Q01974 943 aaKnown RBP11□□□□□ -0.65
HSPG2-212ENST00000493940 TRMT5Q32P41 509 aaKnown RBP11□□□□□ -0.65
HSPG2-212ENST00000493940 TBRG1Q3YBR2 411 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 SLC22A25Q6T423 547 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 CLEC9AQ6UXN8 241 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 H1FNTQ75WM6 255 aaPredicted RBP11□□□□□ -0.65
HSPG2-212ENST00000493940 SNX32Q86XE0 403 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 POU5F2Q8N7G0 328 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 C1orf162Q8NEQ5 155 aaPredicted RBP11□□□□□ -0.65
HSPG2-212ENST00000493940 GTPBP3Q969Y2 492 aaKnown RBP11□□□□□ -0.65
HSPG2-212ENST00000493940 OR2M2Q96R28 347 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 SIKE1Q9BRV8 207 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 LINC00470Q9BZP3 86 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 CXorf56Q9H5V9 222 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 CCDC134Q9H6E4 229 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 CACYBPQ9HB71 228 aaKnown RBP11□□□□□ -0.65
HSPG2-212ENST00000493940 TMEM27Q9HBJ8 222 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 GPR35Q9HC97 309 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 MED29Q9NX70 200 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 MOKQ9UQ07 419 aa11□□□□□ -0.65
HSPG2-212ENST00000493940 HIVEP2P31629 2446 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 LOC102725191A0A1B0GVB3 256 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 ATP6V1G2-DDX39BF2Z307 99 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 PLPP3O14495 311 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 MRASO14807 208 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 AIM2O14862 343 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 OR2T1O43869 369 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 SEC14L2O76054 403 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 C8BP07358 591 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 CELA3BP08861 270 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 ZNF43P17038 809 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 CALCRP30988 508 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 TTKP33981 857 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
HSPG2-212ENST00000493940 ARF1P84077 181 aaKnown RBP10.99□□□□□ -0.65
HSPG2-212ENST00000493940 MST1LQ2TV78 715 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 TMEM108Q6UXF1 575 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 ADAMTS16Q8TE57 1224 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 TMEM43Q9BTV4 400 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 NOX3Q9HBY0 568 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 MEPEQ9NQ76 525 aaPredicted RBP10.99□□□□□ -0.65
HSPG2-212ENST00000493940 TAS2R5Q9NYW4 299 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 AMDHD2Q9Y303 409 aa10.99□□□□□ -0.65
HSPG2-212ENST00000493940 FAM171A2A8MVW0 826 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 ZNF587BE7ETH6 402 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 RPL36A-HNRNPH2H7BZ11 118 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 LY6HO94772 140 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 HEXAP06865 529 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 TROVE2P10155 538 aaKnown RBP eCLIP10.98□□□□□ -0.65
HSPG2-212ENST00000493940 PRPS1P60891 318 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 CLEC12BQ2HXU8 276 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 CEACAM16Q2WEN9 425 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 CARD17Q5XLA6 110 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 ZNF613Q6PF04 617 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 TREML1Q86YW5 311 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 NKAIN4Q8IVV8 208 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 C17orf78Q8N4C9 275 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 BHLHE22Q8NFJ8 381 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-212ENST00000493940 RCN3Q96D15 328 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 DHRS9Q9BPW9 319 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 BDH2Q9BUT1 245 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 ZNF426Q9BUY5 554 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 CMTM6Q9NX76 183 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 MRPL39Q9NYK5 338 aaKnown RBP10.98□□□□□ -0.65
HSPG2-212ENST00000493940 SLC7A7Q9UM01 511 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 ATP23Q9Y6H3 246 aa10.98□□□□□ -0.65
HSPG2-212ENST00000493940 A0A096LNT2 108 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 SLC35F4A4IF30 521 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 RNF223E7ERA6 249 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 C11orf98E9PRG8 122 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 CHP2O43745 196 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 FMO6PO60774 539 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 KRT33AO76009 404 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 CH25HO95992 272 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 MDH1P40925 334 aaKnown RBP10.97□□□□□ -0.65
HSPG2-212ENST00000493940 OR1E2P47887 323 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 NCALDP61601 193 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 POU3F1Q03052 451 aaPredicted RBP10.97□□□□□ -0.65
HSPG2-212ENST00000493940 TGFBR3Q03167 851 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 HGFACQ04756 655 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 CAMK2DQ13557 499 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 CYLC2Q14093 348 aaPredicted RBP10.97□□□□□ -0.65
HSPG2-212ENST00000493940 ANKRD16Q6P6B7 361 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 KLHL17Q6TDP4 642 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 SLC46A3Q7Z3Q1 461 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 PATL1Q86TB9 770 aaKnown RBP10.97□□□□□ -0.65
HSPG2-212ENST00000493940 RANBP3LQ86VV4 465 aaPredicted RBP10.97□□□□□ -0.65
HSPG2-212ENST00000493940 CARM1Q86X55 608 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 PRIMA1Q86XR5 153 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 C20orf196Q8IYI0 205 aa10.97□□□□□ -0.65
HSPG2-212ENST00000493940 ADPRHL1Q8NDY3 354 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms