RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 MND1Q9BWT6 205 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 POLDIP3Q9BY77 421 aaKnown RBP3.14□□□□□ -1.91
SORT1-202ENST00000466471 ULBP1Q9BZM6 244 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 ZNF436Q9C0F3 470 aaPredicted RBP3.14□□□□□ -1.91
SORT1-202ENST00000466471 TKTL2Q9H0I9 626 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 RIBC2Q9H4K1 309 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 RNF167Q9H6Y7 350 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 PDFQ9HBH1 243 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 LRTM1Q9HBL6 345 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 ABCB9Q9NP78 766 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 CD93Q9NPY3 652 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 NRIP3Q9NQ35 241 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 IFT46Q9NQC8 304 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 NANSQ9NR45 359 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.14□□□□□ -1.91
SORT1-202ENST00000466471 DUSP22Q9NRW4 184 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 ABCC13Q9NSE7 274 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 ACER3Q9NUN7 267 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 TMEM184CQ9NVA4 438 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 TXNL4BQ9NX01 149 aaKnown RBP3.14□□□□□ -1.91
SORT1-202ENST00000466471 MARCH5Q9NX47 278 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 MS4A12Q9NXJ0 267 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 IL19Q9UHD0 177 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 UBQLN2Q9UHD9 624 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 SCP2D1Q9UJQ7 156 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 ING1Q9UK53 422 aaPredicted RBP3.14□□□□□ -1.91
SORT1-202ENST00000466471 POMT2Q9UKY4 750 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 ZNF490Q9ULM2 529 aaPredicted RBP3.14□□□□□ -1.91
SORT1-202ENST00000466471 SSR3Q9UNL2 185 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 ST3GAL5Q9UNP4 418 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 ICKQ9UPZ9 632 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 PRELID3BQ9Y3B1 194 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 FAM96BQ9Y3D0 163 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 FIS1Q9Y3D6 152 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 HSPB11Q9Y547 144 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 MAB21L2Q9Y586 359 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 NUBP2Q9Y5Y2 271 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 CACNG2Q9Y698 323 aa3.14□□□□□ -1.91
SORT1-202ENST00000466471 MYO18AQ92614 2054 aaKnown RBP3.14□□□□□ -1.91
SORT1-202ENST00000466471 SVEP1Q4LDE5 3571 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 COL27A1Q8IZC6 1860 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 ABCA4P78363 2273 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 BIRC6Q9NR09 4857 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 A0A0U1RQF3 1178 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 EDDM13A0A1B0GTR0 161 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SMIM35A0A1B0GVV1 85 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 FAM240BA0A1B0GVZ2 78 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 A0A1W2PRG6 482 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 A4D1N5 150 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ZNF98A6NK75 572 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TMEM200CA6NKL6 621 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 HEPACAM2A8MVW5 462 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MAGEB17A8MXT2 336 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 KDM4EB2RXH2 506 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 SUPT3HB4E1H0 165 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 C9JVG2 144 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 E5RI56 91 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ATP6V1G2-DDX39BF2Z307 99 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 J3QRE1 110 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 AIPO00170 330 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CLIC1O00299 241 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TNFRSF11BO00300 401 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CDC7O00311 574 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SLC33A1O00400 549 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 MANBAO00462 879 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 KPNA3O00505 521 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 RFXANKO14593 260 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 PPEF2O14830 753 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SLC16A5O15375 505 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CCL16O15467 120 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 RAD1O60671 282 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 GALR3O60755 368 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 TBX19O60806 448 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 PRAMEF11O60813 436 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CRCPO75575 148 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SERPINI2O75830 405 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 AQP8O94778 261 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 RGS11O94810 467 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CCNB2O95067 398 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SCAF4O95104 1147 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 MPC2O95563 127 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ZNF682O95780 498 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 DHFRP00374 187 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MT-CO3P00414 261 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 EGFP01133 1207 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 IFNA14P01570 189 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 IGLV3-27P01718 113 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 IL5P05113 134 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 S100A6P06703 90 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 RHOP08100 348 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 F7P08709 466 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 ACSM4P0C7M7 580 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ELFN1P0C7U0 828 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SLC2A2P11168 524 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 FCGR2AP12318 317 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ANXA3P12429 323 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 HMGA1P17096 107 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 AMD1P17707 334 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 EPORP19235 508 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 NPR2P20594 1047 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms