RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 TIMP4Q99727 224 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SLC35A5Q9BS91 424 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 INPP5KQ9BT40 448 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ELOVL1Q9BW60 279 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 UGT2B28Q9BY64 529 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RTN4RQ9BZR6 473 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OR51I1Q9H343 314 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DSN1Q9H410 356 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PLK3Q9H4B4 646 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RAD21L1Q9H4I0 556 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 EXO5Q9H790 373 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PTGES2Q9H7Z7 377 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RANGRFQ9HD47 186 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PNPLA3Q9NST1 481 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CHCHD3Q9NX63 227 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 THUMPD1Q9NXG2 353 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DKKL1Q9UK85 242 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FBXL2Q9UKC9 423 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CMAHPQ9Y471 501 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FAM215AQ9Y5M1 114 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 KCNE3Q9Y6H6 103 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SPTAN1Q13813 2472 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DNAJC13O75165 2243 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZNF407Q9C0G0 2248 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RELNP78509 3460 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DOPEY2Q9Y3R5 2298 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 GTF3C1Q12789 2109 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 EML6Q6ZMW3 1958 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SPTBN1Q01082 2364 aaKnown RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DIDO1Q9BTC0 2240 aaKnown RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TRBV5-3A0A0A0MS03 114 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 C15orf38-AP3S2A0A0A6YYH1 394 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 A0A0G2JND7 137 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 A0A1W2PP18 115 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 A0A1W2PRX2 142 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OR2M5A3KFT3 312 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SERINC4A6NH21 518 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 KDM4EB2RXH2 506 aaPredicted RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DIRC3C9JPN6 131 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 C9JVG2 144 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DYNC1I1O14576 645 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SLC22A2O15244 555 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 EIF4E2O60573 245 aaKnown RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SMPD2O60906 423 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 UGT2B17O75795 530 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TRAPPC6AO75865 159 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 NTN1O95631 604 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 EPPINO95925 133 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 HLA-DQA2P01906 255 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OPN1MWP04001 364 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 INHBBP09529 407 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OPN1MW2P0DN77 364 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OPN1MW3P0DN78 364 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OR12D1P0DN82 309 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PEPDP12955 493 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 HPGDP15428 266 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZNF708P17019 499 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 BMP7P18075 431 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RPS4Y1P22090 263 aaKnown RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ELK4P28324 431 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CEACAM8P31997 349 aaPredicted RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TIMP3P35625 211 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 EIF1P41567 113 aaKnown RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CDKN2CP42773 168 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RFX3P48380 749 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 LHX2P50458 406 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 NME5P56597 212 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CLDN18P56856 261 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 NUP107P57740 925 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 GMFBP60983 142 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 HPCAP84074 193 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 STX5Q13190 355 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 GNA13Q14344 377 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FGFBP1Q14512 234 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CD226Q15762 336 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZSWIM7Q19AV6 140 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PLPPR5Q32ZL2 321 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ACSF3Q4G176 576 aaPredicted RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TIGD2Q4W5G0 525 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 AGKQ53H12 422 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SLC25A53Q5H9E4 307 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 COQ5Q5HYK3 327 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DCST1Q5T197 706 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CCNJQ5T5M9 372 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 NSUN5P2Q63ZY6 315 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SP5Q6BEB4 398 aaPredicted RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TYW3Q6IPR3 259 aaKnown RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CGB2Q6NT52 195 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TNFAIP8L2Q6P589 184 aaPredicted RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 B3GNT6Q6ZMB0 384 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FRRS1Q6ZNA5 592 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 LRRC74BQ6ZQY2 392 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZNF621Q6ZSS3 439 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 C16orf62Q7Z3J2 963 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 MRGPRGQ86SM5 289 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 YRDCQ86U90 279 aaKnown RBP4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RNF130Q86XS8 419 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 LACC1Q8IV20 430 aa4.16□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 P3H2Q8IVL5 708 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms