RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 TMEM117Q9H0C3 514 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 SLC38A10Q9HBR0 1119 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 ZFP14Q9HCL3 533 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 FANCFQ9NPI8 374 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 RGS18Q9NS28 235 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 DCAF13Q9NV06 445 aaKnown RBP0.88□□□□□ -2.27
LRCH3-209ENST00000452660 RBM28Q9NW13 759 aaKnown RBP0.88□□□□□ -2.27
LRCH3-209ENST00000452660 HYPKQ9NX55 129 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 BTNL2Q9UIR0 455 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 EXOSC1Q9Y3B2 195 aaKnown RBP0.88□□□□□ -2.27
LRCH3-209ENST00000452660 ZNF638Q14966 1978 aaKnown RBP0.88□□□□□ -2.27
LRCH3-209ENST00000452660 SCN8AQ9UQD0 1980 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 DNAH7Q8WXX0 4024 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 ANK1P16157 1881 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 USF3Q68DE3 2245 aa0.88□□□□□ -2.27
LRCH3-209ENST00000452660 COL7A1Q02388 2944 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 MYH9P35579 1960 aaKnown RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 HSPG2P98160 4391 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 NUP210Q8TEM1 1887 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 IGHV1OR15-9A0A0B4J2B8 117 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 HEATR9A2RTY3 570 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 COLCA2A8K830 154 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 DKC1O60832 514 aaKnown RBP eCLIP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 SDC3O75056 442 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 RCBTB2O95199 551 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 KLF8O95600 359 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 NDUFB10O96000 172 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 IGFBP1P08833 259 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 OTX2P32243 289 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 OR1G1P47890 313 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 DUSP3P51452 185 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 CCR6P51684 374 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 ST8SIA6P61647 398 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 HERV-K104P63124 156 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 PLOD1Q02809 727 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 PRSS8Q16651 343 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 DEFB116Q30KQ4 102 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 DEFB109BQ30KR1 87 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 KBTBD12Q3ZCT8 623 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 USH1GQ495M9 461 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 MARCH8Q5T0T0 291 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 LIN9Q5TKA1 542 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 NKAIN2Q5VXU1 208 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 LEG1Q6P5S2 330 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 UNC5DQ6UXZ4 953 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 BRD3OSQ6XYD6 125 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 C6orf120Q7Z4R8 191 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 TMEM135Q86UB9 458 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 FAM228AQ86W67 206 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 IFNEQ86WN2 208 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 RALGPS2Q86X27 583 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 ECHDC2Q86YB7 292 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 MFSD6LQ8IWD5 586 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 STHQ8IWL8 128 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 MLKLQ8NB16 471 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 OR2T33Q8NG76 320 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 DEPDC1BQ8WUY9 529 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 MR1Q95460 341 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 EPSTI1Q96J88 318 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 TAAR1Q96RJ0 339 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 BAG1Q99933 345 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 FOXC2Q99958 501 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 CARD6Q9BX69 1037 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 FTHL17Q9BXU8 183 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 FAM124BQ9H5Z6 455 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 C8orf33Q9H7E9 229 aaPredicted RBP0.87□□□□□ -2.27
LRCH3-209ENST00000452660 SYNDIG1Q9H7V2 258 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 RNPEPL1Q9HAU8 725 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 ASF1BQ9NVP2 202 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 TRPC4Q9UBN4 977 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 FZR1Q9UM11 496 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 KLHDC2Q9Y2U9 406 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 MYH7P12883 1935 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 IGSF9BQ9UPX0 1349 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 DNAH3Q8TD57 4116 aa0.87□□□□□ -2.27
LRCH3-209ENST00000452660 HUWE1Q7Z6Z7 4374 aaKnown RBP0.86□□□□□ -2.27
LRCH3-209ENST00000452660 ALMS1Q8TCU4 4167 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 FAT1Q14517 4588 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 PKHD1P08F94 4074 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 PIKFYVEQ9Y2I7 2098 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 TRIM64A6NGJ6 449 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 FBLL1A6NHQ2 334 aaKnown RBP0.86□□□□□ -2.27
LRCH3-209ENST00000452660 TRIM64BA6NI03 449 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 ZNF233A6NK53 670 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 K7EQS6 105 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 TRDMT1O14717 391 aaKnown RBP0.86□□□□□ -2.27
LRCH3-209ENST00000452660 CHADO15335 359 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 TTI1O43156 1089 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 ZNF264O43296 627 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 PCCBP05166 539 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 PLEKP08567 350 aaPredicted RBP0.86□□□□□ -2.27
LRCH3-209ENST00000452660 RNH1P13489 461 aaKnown RBP0.86□□□□□ -2.27
LRCH3-209ENST00000452660 GNSP15586 552 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 GABRG2P18507 467 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 HOXA9P31269 272 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 GCKP35557 465 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 KRT20P35900 424 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 TNFSF9P41273 254 aa0.86□□□□□ -2.27
LRCH3-209ENST00000452660 SH3BGRP55822 239 aaPredicted RBP0.86□□□□□ -2.27
LRCH3-209ENST00000452660 ARPP19P56211 112 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms