RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MUC15Q8N387 334 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 SCAIQ8N9R8 606 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 PCYOX1LQ8NBM8 494 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 ADPRHL1Q8NDY3 354 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 BOD1Q96IK1 185 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 ARHGDIGQ99819 225 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 TMEM43Q9BTV4 400 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 RSPO3Q9BXY4 272 aaPredicted RBP12.03□□□□□ -0.48
CXCL12-205ENST00000395794 CBLN4Q9NTU7 201 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 FGFR1OP2Q9NVK5 253 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 SEC14L4Q9UDX3 406 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 FREM1Q5H8C1 2179 aa12.03□□□□□ -0.48
CXCL12-205ENST00000395794 CPSF4LA6NMK7 179 aaKnown RBP12.02□□□□□ -0.49
CXCL12-205ENST00000395794 ZNF726A6NNF4 738 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 CD8AP01732 235 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 CRYAAP02489 173 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 PTNP21246 168 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 SLC25A3Q00325 362 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 SF3A3Q12874 501 aaKnown RBP eCLIP12.02□□□□□ -0.49
CXCL12-205ENST00000395794 TNK1Q13470 666 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 RAB35Q15286 201 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 VMACQ2NL98 169 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 COQ5Q5HYK3 327 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 NANOGP8Q6NSW7 305 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 VANGL1Q8TAA9 524 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-205ENST00000395794 MAGEE2Q8TD90 523 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-205ENST00000395794 PROX1Q92786 737 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 BCL2L2Q92843 193 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-205ENST00000395794 LRRC58Q96CX6 371 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 CACNG6Q9BXT2 260 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 NANOGQ9H9S0 305 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 B3GAT2Q9NPZ5 323 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 GID8Q9NWU2 228 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 MRPL39Q9NYK5 338 aaKnown RBP12.02□□□□□ -0.49
CXCL12-205ENST00000395794 B3GAT1Q9P2W7 334 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 NOX1Q9Y5S8 564 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 ZFHX3Q15911 3703 aa12.02□□□□□ -0.49
CXCL12-205ENST00000395794 NIPBLQ6KC79 2804 aaeCLIP12.01□□□□□ -0.49
CXCL12-205ENST00000395794 ACANP16112 2415 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 A0A096LPE4 126 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 ARPC4-TTLL3A0A0A6YYG9 625 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 A0A1W2PPZ6 126 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 FBP2O00757 339 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 MRASO14807 208 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 CHP2O43745 196 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 TPST2O60704 377 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 FZD7O75084 574 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 ZNF432O94892 652 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 MT-ATP6P00846 226 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 IFNA14P01570 189 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 IGHV4-39P01824 125 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 HIST1H2ABP04908 130 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 HOXB4P17483 251 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-205ENST00000395794 CD247P20963 164 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 AHCYP23526 432 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 APOBEC3AP31941 199 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-205ENST00000395794 ACVR1BP36896 505 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 NUDT6P53370 316 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 ARF1P84077 181 aaKnown RBP12.01□□□□□ -0.49
CXCL12-205ENST00000395794 PPP2R2BQ00005 443 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 POU3F1Q03052 451 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-205ENST00000395794 PUDPQ08623 228 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 KLF10Q13118 480 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 KRTAP21-3Q3LHN1 58 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 ENTPD8Q5MY95 495 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 ERICH5Q6P6B1 374 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 TTC33Q6PID6 262 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-205ENST00000395794 HIST3H2AQ7L7L0 130 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 SNX32Q86XE0 403 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 GPR32P1Q8NGA4 272 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 OR8J3Q8NGG0 315 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 OR6T1Q8NGN1 323 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 HIST1H2ACQ93077 130 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 SLC41A3Q96GZ6 507 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 SLC38A2Q96QD8 506 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 OR2M2Q96R28 347 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 CRLF2Q9HC73 371 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 SAR1AQ9NR31 198 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 BAG5Q9UL15 447 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 MOKQ9UQ07 419 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 PMF1-BGLAPU3KQ54 211 aa12.01□□□□□ -0.49
CXCL12-205ENST00000395794 LOC100653049A0A140TA62 436 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 TRAPPC13A5PLN9 417 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 VSTM5A8MXK1 200 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 RNF223E7ERA6 249 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 ATP6V1G2-DDX39BF2Z307 99 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 MS4A18H0YCH9 400 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 RPL36A-HNRNPH2H7BZ11 118 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 M0R3G1 203 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 SSX4O60224 188 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 KRT34O76011 436 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 BGLAPP02818 100 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 CAPZA2P47755 286 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 DSCR9P59020 149 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 CEACAM16Q2WEN9 425 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 MS4A18Q3C1V0 323 aa12□□□□□ -0.49
CXCL12-205ENST00000395794 CARD17Q5XLA6 110 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms