RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 KCTD8Q6ZWB6 473 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 CCDC90BQ9GZT6 254 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 ZNF703Q9H7S9 590 aaPredicted RBP18.71■□□□□ 0.59
PNKP-203ENST00000593946 ALKBH4Q9NXW9 302 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 KLHL21Q9UJP4 597 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 SNX5Q9Y5X3 404 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 DMXL2Q8TDJ6 3036 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 SNTNA6NMZ2 147 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 IMPA2O14732 288 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 TXNDC12O95881 172 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 PCMT1P22061 227 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 GDF1P27539 372 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 SDHAP31040 664 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 SFTPDP35247 375 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 ST3GAL4Q11206 333 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 ITGADQ13349 1161 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 CRMP1Q14194 572 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 TMEM176BQ3YBM2 270 aaPredicted RBP18.7■□□□□ 0.58
PNKP-203ENST00000593946 XAF1Q6GPH4 301 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 PLBD1Q6P4A8 553 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 GALNTL5Q7Z4T8 443 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 YRDCQ86U90 279 aaKnown RBP18.7■□□□□ 0.58
PNKP-203ENST00000593946 BBS1Q8NFJ9 593 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 OR14L1PQ8NHC6 308 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 RFKQ969G6 155 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 SCMH1Q96GD3 660 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 C5orf34Q96MH7 638 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 OR5B2Q96R09 309 aa18.7■□□□□ 0.58
PNKP-203ENST00000593946 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.7■□□□□ 0.58
PNKP-203ENST00000593946 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.7■□□□□ 0.58
PNKP-203ENST00000593946 A0A1W2PNR3 127 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 PRR23D1E9PI22 279 aaPredicted RBP18.69■□□□□ 0.58
PNKP-203ENST00000593946 OPN1LWP04000 364 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 STSP08842 583 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 PRR23D2P0DMB1 279 aaPredicted RBP18.69■□□□□ 0.58
PNKP-203ENST00000593946 GTF2E2P29084 291 aaKnown RBP18.69■□□□□ 0.58
PNKP-203ENST00000593946 TNFSF10P50591 281 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 CDH11P55287 796 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 MVKQ03426 396 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 NADK2Q4G0N4 442 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 H1FNTQ75WM6 255 aaPredicted RBP18.69■□□□□ 0.58
PNKP-203ENST00000593946 GID4Q8IVV7 300 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 SLC37A3Q8NCC5 494 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 OR52E2Q8NGJ4 325 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 OR4K13Q8NH42 304 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 PTP4A1Q93096 173 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 RASD2Q96D21 266 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 Q96M85 177 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 HCAR1Q9BXC0 346 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 TTTY12Q9BZ98 90 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 MED20Q9H944 212 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 CHST11Q9NPF2 352 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 MRPS18AQ9NVS2 196 aaKnown RBP18.69■□□□□ 0.58
PNKP-203ENST00000593946 DKK4Q9UBT3 224 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 B4GALT7Q9UBV7 327 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 TRAPPC4Q9Y296 219 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 TNRC6AQ8NDV7 1962 aaKnown RBP18.69■□□□□ 0.58
PNKP-203ENST00000593946 C11orf98E9PRG8 122 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 KLRC4-KLRK1H3BQV0 150 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 RNF13O43567 381 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 C21orf33P30042 268 aaPredicted RBP18.69■□□□□ 0.58
PNKP-203ENST00000593946 RAC1P63000 192 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 EMX1Q04741 257 aaPredicted RBP18.69■□□□□ 0.58
PNKP-203ENST00000593946 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.69■□□□□ 0.58
PNKP-203ENST00000593946 ZP4Q12836 540 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 EMC4Q5J8M3 183 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 NIPAL3Q6P499 406 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 SATL1Q86VE3 508 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 STX19Q8N4C7 294 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 CYB561A3Q8NBI2 242 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 SDR9C7Q8NEX9 313 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 MIB2Q96AX9 1013 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 TSPAN32Q96QS1 320 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 DDOQ99489 341 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 VCX3AQ9NNX9 186 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 INIPQ9NRY2 104 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 B3GALT5Q9Y2C3 310 aa18.69■□□□□ 0.58
PNKP-203ENST00000593946 TEX13CA0A0J9YWL9 993 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 MS4A18H0YCH9 400 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 TRAPPC6AO75865 159 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 GLSO94925 669 aaPredicted RBP18.68■□□□□ 0.58
PNKP-203ENST00000593946 OR6A2O95222 327 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 JUNBP17275 347 aaPredicted RBP18.68■□□□□ 0.58
PNKP-203ENST00000593946 PAICSP22234 425 aaKnown RBP18.68■□□□□ 0.58
PNKP-203ENST00000593946 HTR1FP30939 366 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 MTNR1AP48039 350 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 MEOX1P50221 254 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 PUDPQ08623 228 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 NEDD8Q15843 81 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 MS4A18Q3C1V0 323 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 ZNF766Q5HY98 468 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 GPR139Q6DWJ6 353 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 FAM98AQ8NCA5 519 aaKnown RBP18.68■□□□□ 0.58
PNKP-203ENST00000593946 LSM14AQ8ND56 463 aaKnown RBP18.68■□□□□ 0.58
PNKP-203ENST00000593946 NPEPL1Q8NDH3 523 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 ADPRHL1Q8NDY3 354 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 FANCFQ9NPI8 374 aa18.68■□□□□ 0.58
PNKP-203ENST00000593946 H2AFY2Q9P0M6 372 aaPredicted RBP18.68■□□□□ 0.58
PNKP-203ENST00000593946 URB1O60287 2271 aaKnown RBP18.67■□□□□ 0.58
PNKP-203ENST00000593946 PMS2P2O95744 297 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms