RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 HS3ST1O14792 307 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 AIM2O14862 343 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 CCDC22O60826 627 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 COX4I1P13073 169 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 PTNP21246 168 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 CBLP22681 906 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 MPGP29372 298 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 OR7E24Q6IFN5 339 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 ERICH5Q6P6B1 374 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 H1FNTQ75WM6 255 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 SSX8Q7RTT4 187 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 SPATA21Q7Z572 469 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 OR52N5Q8NH56 324 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 VANGL1Q8TAA9 524 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 ADAMTS16Q8TE57 1224 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 RASSF5Q8WWW0 418 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 AKAP1Q92667 903 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 SLC41A3Q96GZ6 507 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 MOGAT1Q96PD6 335 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 CCL19Q99731 98 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 CMTM6Q9NX76 183 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 A0A1W2PR80 420 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 MS4A18H0YCH9 400 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 CHP2O43745 196 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 ZNF432O94892 652 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 CD3EP07766 207 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 ZNF43P17038 809 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 GTF2E2P29084 291 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 MS4A18Q3C1V0 323 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 NHLRC1Q6VVB1 395 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 LINGO2Q7L985 606 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 SLC15A3Q8IY34 581 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 ZNF611Q8N823 705 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 ADPRHL1Q8NDY3 354 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 C1orf162Q8NEQ5 155 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 NEUROG1Q92886 237 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 BOD1Q96IK1 185 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 EPYCQ99645 322 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 MYLK2Q9H1R3 596 aa16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 GMPR2Q9P2T1 348 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-202ENST00000593764 FAM220BPB1ANY3 271 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 LRRN3E7EW58 273 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 CLOCKO15516 846 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 UPK3AO75631 287 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 HPRP00739 348 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 DRD4P21917 467 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 CLDN17P56750 224 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 MFSD13AQ14CX5 517 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 C8orf82Q6P1X6 216 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 NIPAL3Q6P499 406 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 WFDC11Q8NEX6 87 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 OR2T12Q8NG77 320 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 SLC17A5Q9NRA2 495 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 SLC7A7Q9UM01 511 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 SH3GLB1Q9Y371 365 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 CORINQ9Y5Q5 1042 aa16.22■□□□□ 0.19
SHKBP1-202ENST00000593764 FLNAP21333 2647 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 PLCE1Q9P212 2302 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 TRAPPC13A5PLN9 417 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 SHISA9B4DS77 424 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 TRAF3IP2O43734 574 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 SMPD2O60906 423 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 HLA-DOBP13765 273 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 TNFRSF1BP20333 461 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 LSP1P33241 339 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 KDELR2P33947 212 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 GYS2P54840 703 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 NKX6-1P78426 367 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 SLC25A3Q00325 362 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 TGFBR3Q03167 851 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 FOXD4Q12950 439 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 ZNF672Q499Z4 452 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 CARM1Q86X55 608 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 MICU2Q8IYU8 434 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 LRRC75A-AS1Q8N1F1 130 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 C17orf78Q8N4C9 275 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 SCAIQ8N9R8 606 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 KBTBD8Q8NFY9 601 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 PROX1Q92786 737 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 PRSS27Q9BQR3 290 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 ZNF426Q9BUY5 554 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 LINC00470Q9BZP3 86 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 MRPL39Q9NYK5 338 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 RCE1Q9Y256 329 aa16.21■□□□□ 0.19
SHKBP1-202ENST00000593764 ELOVL7A1L3X0 281 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 OR6C65A6NJZ3 312 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 SNX3O60493 162 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 DANCRP0C864 163 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 CD99P14209 185 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 CDH2P19022 906 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 ZNF83P51522 516 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 C1DQ13901 141 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 ABHD12BQ7Z5M8 362 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 ALKBH3Q96Q83 286 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 C1QTNF6Q9BXI9 259 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 FAM107BQ9H098 131 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 EFCAB1Q9HAE3 211 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 DLL4Q9NR61 685 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 BAG5Q9UL15 447 aa16.2■□□□□ 0.18
SHKBP1-202ENST00000593764 ZFHX3Q15911 3703 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms