RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 GPR119Q8TDV5 335 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 DUSP19Q8WTR2 217 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 THAP3Q8WTV1 239 aaPredicted RBP16.46■□□□□ 0.23
SMPD3-211ENST00000568373 DIRAS2Q96HU8 199 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 GFM1Q96RP9 751 aaKnown RBP16.46■□□□□ 0.23
SMPD3-211ENST00000568373 SPSB2Q99619 263 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 ATF6BQ99941 703 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 RNF32Q9H0A6 362 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 GRHPRQ9UBQ7 328 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 ST6GALNAC2Q9UJ37 374 aa16.46■□□□□ 0.23
SMPD3-211ENST00000568373 ZNF354AO60765 605 aaPredicted RBP16.46■□□□□ 0.22
SMPD3-211ENST00000568373 WISP1O95388 367 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 PPP3R1P63098 170 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 C1QL3Q5VWW1 255 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 FAM131AQ6UXB0 335 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 GRINAQ7Z429 371 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 EXD3Q8N9H8 876 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 CEP76Q8TAP6 659 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 ABHD4Q8TB40 342 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 SNX33Q8WV41 574 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 HTRA1Q92743 480 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 PELI1Q96FA3 418 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 NEURL2Q9BR09 285 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 ALG12Q9BV10 488 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 SLC26A1Q9H2B4 701 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 GRIP1Q9Y3R0 1128 aa16.46■□□□□ 0.22
SMPD3-211ENST00000568373 TMED7-TICAM2A0A0A6YYA0 188 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 TRBV11-1A0A0K0K1C0 115 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 FABP12A6NFH5 140 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 SUSD5O60279 629 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 SC5DO75845 299 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 ACVR1BP36896 505 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 FBXW4P57775 412 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 LCN10Q6JVE6 187 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 CPEB2Q7Z5Q1 589 aaKnown RBP16.45■□□□□ 0.22
SMPD3-211ENST00000568373 BPHLQ86WA6 291 aaPredicted RBP16.45■□□□□ 0.22
SMPD3-211ENST00000568373 TMCO6Q96DC7 493 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 TSPAN32Q96QS1 320 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 CRB3Q9BUF7 120 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 PPIL3Q9H2H8 161 aaKnown RBP16.45■□□□□ 0.22
SMPD3-211ENST00000568373 TAS2R10Q9NYW0 307 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 NCDNQ9UBB6 729 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 COMMD3Q9UBI1 195 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 COPS3Q9UNS2 423 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 MOKQ9UQ07 419 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 TMED7Q9Y3B3 224 aa16.45■□□□□ 0.22
SMPD3-211ENST00000568373 D6RAR5 112 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 MEN1O00255 615 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 MAGEB4O15481 346 aaPredicted RBP16.44■□□□□ 0.22
SMPD3-211ENST00000568373 OGG1O15527 345 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 CPNE3O75131 537 aaKnown RBP16.44■□□□□ 0.22
SMPD3-211ENST00000568373 NPIPB7O75200 414 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 DLGAP3O95886 979 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 MT-ATP6P00846 226 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 FGF5P12034 268 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 GBX2P52951 348 aaPredicted RBP16.44■□□□□ 0.22
SMPD3-211ENST00000568373 HSF2Q03933 536 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 COL28A1Q2UY09 1125 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 TRIM61Q5EBN2 209 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 GPR139Q6DWJ6 353 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 LYPD4Q6UWN0 246 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 PRR23CQ6ZRP0 262 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 ADGRG3Q86Y34 549 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 MS4A15Q8N5U1 240 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 GHSRQ92847 366 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 MRPL48Q96GC5 212 aaKnown RBP16.44■□□□□ 0.22
SMPD3-211ENST00000568373 CTRCQ99895 268 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 PTDSS2Q9BVG9 487 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 TMEM200CA6NKL6 621 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 AZGP1P25311 298 aaKnown RBP16.44■□□□□ 0.22
SMPD3-211ENST00000568373 IL11RAQ14626 422 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 CDK5R1Q15078 307 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 MESTQ5EB52 335 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 XKRXQ6PP77 449 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 MAMDC2Q7Z304 686 aaPredicted RBP16.44■□□□□ 0.22
SMPD3-211ENST00000568373 CEACAM19Q7Z692 300 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 PXKQ7Z7A4 578 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 CADM3Q8N126 398 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 OR8K3Q8NH51 312 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 SMIM19Q96E16 107 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 TSSK2Q96PF2 358 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 MARCH7Q9H992 704 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 GNG8Q9UK08 70 aa16.44■□□□□ 0.22
SMPD3-211ENST00000568373 TMEM72A0PK05 275 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 A8MVM7 634 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 FAM171A2A8MVW0 826 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 SHC1P29353 583 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 DUSP3P51452 185 aaPredicted RBP16.43■□□□□ 0.22
SMPD3-211ENST00000568373 SIRPAP78324 504 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 BAK1Q16611 211 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 FAM69AQ5T7M9 428 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 FAM27D1Q5T7N8 215 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 TMEM205Q6UW68 189 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 NR2C2APQ86WQ0 139 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 OR5L2Q8NGL0 311 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 SETD6Q8TBK2 473 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 HGDQ93099 445 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 KIAA1143Q96AT1 154 aaPredicted RBP16.43■□□□□ 0.22
SMPD3-211ENST00000568373 DNAJA3Q96EY1 480 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 RXFP3Q9NSD7 469 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms