RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 LCN12Q6JVE5 192 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 CES3Q6UWW8 571 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 LHFPL4Q7Z7J7 247 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 FAM71CQ8NEG0 241 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 OR4K14Q8NGD5 310 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 ACOT11Q8WXI4 607 aaPredicted RBP0.73□□□□□ -2.29
FOXN3-216ENST00000557496 SEC22AQ96IW7 307 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 AKR1E2Q96JD6 320 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 RIOK2Q9BVS4 552 aaKnown RBP0.73□□□□□ -2.29
FOXN3-216ENST00000557496 RNF167Q9H6Y7 350 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 RANBP3Q9H6Z4 567 aaPredicted RBP0.73□□□□□ -2.29
FOXN3-216ENST00000557496 MID1IP1Q9NPA3 183 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 IL26Q9NPH9 171 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 GLRX2Q9NS18 164 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TERF2IPQ9NYB0 399 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TBK1Q9UHD2 729 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TNS2Q63HR2 1409 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 A0A1W2PNN7 141 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 CFAP73A6NFT4 308 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 TRDCB7Z8K6 153 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 H0YHG0 523 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 H3BNH8 94 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 DNASE2O00115 360 aaPredicted RBP0.72□□□□□ -2.29
FOXN3-216ENST00000557496 LGALS9O00182 355 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 KLK3P07288 261 aaPredicted RBP0.72□□□□□ -2.29
FOXN3-216ENST00000557496 UBTFL1P0CB47 393 aaPredicted RBP0.72□□□□□ -2.29
FOXN3-216ENST00000557496 RRASP10301 218 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 STARD6P59095 220 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 EWSR1Q01844 656 aaKnown RBP eCLIP0.72□□□□□ -2.29
FOXN3-216ENST00000557496 SPP2Q13103 211 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 OR2G6Q5TZ20 316 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 OR6B2Q6IFH4 312 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 HCP5Q6MZN7 132 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 ZNF664Q8N3J9 261 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 CATSPER1Q8NEC5 780 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 OR56B1Q8NGI3 324 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 OR1P1Q8NH06 330 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 PHOSPHO2Q8TCD6 241 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 HTR3CQ8WXA8 447 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 CMTM7Q96FZ5 175 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 LZTS2Q9BRK4 669 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 LINC00597Q9H2U6 94 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 DHX33Q9H6R0 707 aaKnown RBP0.72□□□□□ -2.29
FOXN3-216ENST00000557496 ECT2Q9H8V3 914 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 WDR76Q9H967 626 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 ROPN1Q9HAT0 212 aaPredicted RBP0.72□□□□□ -2.29
FOXN3-216ENST00000557496 EXD2Q9NVH0 621 aa0.72□□□□□ -2.29
FOXN3-216ENST00000557496 GPATCH8Q9UKJ3 1502 aaKnown RBP0.72□□□□□ -2.29
FOXN3-216ENST00000557496 NSG1A0A0A6YYJ2 146 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 SLC9B1P1A6NJY1 282 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 J3QRE1 110 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 HIP1O00291 1037 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 XKRYO14609 159 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 CCNE2O96020 404 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 ALDOBP05062 364 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 CA3P07451 260 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 GKN3PP0CG01 181 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 PRPS2P11908 318 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 SFNP31947 248 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 PTGFRP43088 359 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 CX3CR1P49238 355 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 SLC26A5P58743 744 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 FLI1Q01543 452 aaPredicted RBP0.71□□□□□ -2.3
FOXN3-216ENST00000557496 CCDC40Q4G0X9 1142 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 ETFRF1Q6IPR1 90 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 H2AFVQ71UI9 128 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 DHRSXQ8N5I4 330 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 BCORP1Q8N888 145 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 ATP6V0D2Q8N8Y2 350 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 RTN4IP1Q8WWV3 396 aaPredicted RBP0.71□□□□□ -2.3
FOXN3-216ENST00000557496 FCGR1BQ92637 280 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 MYLPFQ96A32 169 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 C12orf66Q96MD2 445 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 NSMCE2Q96MF7 247 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 TIMM29Q9BSF4 260 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 GORASP2Q9H8Y8 452 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 SYTL2Q9HCH5 934 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 HMG20AQ9NP66 347 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 YAE1D1Q9NRH1 226 aa0.71□□□□□ -2.3
FOXN3-216ENST00000557496 CARMIL1Q5VZK9 1371 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 FAM230AA0A1W2PPH8 454 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 LOC110117498-PIK3R3F6TDL0 507 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 SDHDO14521 159 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 RS1O15537 224 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 TOM1L1O75674 476 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 CSF3P09919 207 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 H2BFMP0C1H6 154 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 SMIM10L1P0DMW3 83 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 POLR2EP19388 210 aaKnown RBP0.7□□□□□ -2.3
FOXN3-216ENST00000557496 COX5AP20674 150 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 NAPAP54920 295 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 KRTAP12-1P59990 96 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 SLC7A9P82251 487 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 ACVR1Q04771 509 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 ASPHQ12797 758 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 ERCC8Q13216 396 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 FZD2Q14332 565 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 MICBQ29980 383 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 SAMD4BQ5PRF9 694 aaKnown RBP0.7□□□□□ -2.3
FOXN3-216ENST00000557496 UNQ9165/PRO28630Q6UXU0 137 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms