RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 KLHL1Q9NR64 748 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 TUBA8Q9NY65 449 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-213ENST00000550629 ANAPC2Q9UJX6 822 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 CARD8Q9Y2G2 431 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 CSAG2Q9Y5P2 127 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 LAMA5O15230 3695 aa5.18□□□□□ -1.58
SCAF11-213ENST00000550629 BOD1L1Q8NFC6 3051 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 CFAP46Q8IYW2 2715 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 NPIPA5A0A0B4J1W7 369 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 TCRBV3S1A0A5B6 114 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 DHRS12A0PJE2 317 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 HTR3EA5X5Y0 456 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 CLDN24A6NM45 220 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 NPIPA7E9PJI5 369 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 TPST1O60507 370 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 CDC40O60508 579 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 HCN1O60741 890 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 SORBS2O94875 1100 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 NTN1O95631 604 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 EPPINO95925 133 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 OPN1SWP03999 348 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 SEMG1P04279 462 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 UBTFL6P0CB48 400 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 NPIPA8P0DM63 369 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 PNMTP11086 282 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 NQO1P15559 274 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF24P17028 368 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ATP6V1B2P21281 511 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 PSMA4P25789 261 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 DPP4P27487 766 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ELK4P28324 431 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 IFNA8P32881 189 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 GCKP35557 465 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ACAA2P42765 397 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 SLC1A3P43003 542 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 MAGEA2P43356 314 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 DNASE1L1P49184 302 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF136P52737 540 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 RGS8P57771 180 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ACTR3P61158 418 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 COPZ1P61923 177 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 PPIAP62937 165 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 PLGLB1Q02325 96 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 EPS8Q12929 822 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 GK3PQ14409 553 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 TMEM44Q2T9K0 475 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 NADK2Q4G0N4 442 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 FAM98BQ52LJ0 330 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 SLC25A53Q5H9E4 307 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 WBP2NLQ6ICG8 309 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ZFP1Q6P2D0 407 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF613Q6PF04 617 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ULK3Q6PHR2 472 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 CBLN3Q6UW01 205 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 CYP4Z1Q86W10 505 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 CARM1Q86X55 608 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 GTPBP8Q8N3Z3 284 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 FAM109AQ8N4B1 249 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 TMCO5AQ8N6Q1 288 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 TEX19Q8NA77 164 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 GATSQ8NAP1 163 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 PAPD5Q8NDF8 572 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 GPR119Q8TDV5 335 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 DNAJA4Q8WW22 397 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 DUS3LQ96G46 650 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 TPD52L3Q96J77 140 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF347Q96SE7 839 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 BARD1Q99728 777 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 RSPO3Q9BXY4 272 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 HES7Q9BYE0 225 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 TTTY12Q9BZ98 90 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 DSN1Q9H410 356 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ANKRD19PQ9H560 264 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 YY1AP1Q9H869 796 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ZDHHC11Q9H8X9 412 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 C12orf10Q9HB07 376 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 IL1RAPQ9NPH3 570 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ACER3Q9NUN7 267 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 MED17Q9NVC6 651 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 TAS2R10Q9NYW0 307 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 SH3GLB1Q9Y371 365 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 ENPP4Q9Y6X5 453 aa5.17□□□□□ -1.58
SCAF11-213ENST00000550629 PRRC2CQ9Y520 2896 aaKnown RBP5.17□□□□□ -1.58
SCAF11-213ENST00000550629 EXPH5Q8NEV8 1989 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 A0A1B0GVC2 190 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 TRAPPC13A5PLN9 417 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PINLYPA6NC86 204 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ERICH4A6NGS2 130 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 GJE1A6NN92 205 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 B4DXG7 233 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 G3V3Y1 287 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 AP3D1O14617 1153 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 TFECO14948 347 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ZIC3O60481 467 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PROP1O75360 226 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 BCAS1O75363 584 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 OR5F1O95221 314 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 NUDT14O95848 222 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ACTL6AO96019 429 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms