RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ATP6AP1LQ52LC2 224 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 GPAT3Q53EU6 434 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 PRAMEF8Q5VWM4 474 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 PRAMEF7Q5VXH5 474 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 CMIPQ8IY22 773 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 GPR137CQ8N3F9 429 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 IFT81Q8WYA0 676 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 CNOT9Q92600 299 aaKnown RBP10.77□□□□□ -0.69
DDX41-215ENST00000512431 KCNF1Q9H3M0 494 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 DUSP13Q9UII6 198 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 DNAJC15Q9Y5T4 150 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 TRRAPQ9Y4A5 3859 aa10.77□□□□□ -0.69
DDX41-215ENST00000512431 CFAP73A6NFT4 308 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 CLDN24A6NM45 220 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 PEX11AO75192 247 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 SLC43A1O75387 559 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 NAT2P11245 290 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 CPA3P15088 417 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 CASQ1P31415 396 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 LSP1P33241 339 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 CCT5P48643 541 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 CLDN17P56750 224 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 SELENOVP59797 346 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 TEKQ02763 1124 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 BAMBIQ13145 260 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 MAD2L1BPQ15013 274 aaPredicted RBP10.76□□□□□ -0.69
DDX41-215ENST00000512431 NKPD1Q17RQ9 610 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 PGS1Q32NB8 556 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 AVPI1Q5T686 147 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 KANK2Q63ZY3 851 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 FRRS1Q6ZNA5 592 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 HMGN2P46Q86SG4 172 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 RETREG3Q86VR2 466 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 CLEC4FQ8N1N0 589 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 SYT14Q8NB59 555 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 MIPOL1Q8TD10 442 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 TWIST2Q8WVJ9 160 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 RAB8BQ92930 207 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 SLC25A28Q96A46 364 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 ZG16BQ96DA0 208 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 DUX5Q96PT3 197 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 EMCNQ9ULC0 261 aa10.76□□□□□ -0.69
DDX41-215ENST00000512431 DNAJC9-AS1A6NH13 148 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 A8MVM7 634 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 FAAHO00519 579 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 CDC14BO60729 498 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 RP2O75695 350 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 PROCP04070 461 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 CD79AP11912 226 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 ZNF43P17038 809 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 GCAP28676 217 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 GTF2E2P29084 291 aaKnown RBP10.75□□□□□ -0.69
DDX41-215ENST00000512431 GSG1Q2KHT4 349 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 CEACAM16Q2WEN9 425 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 TNFAIP8L2Q6P589 184 aaPredicted RBP10.75□□□□□ -0.69
DDX41-215ENST00000512431 TMEM154Q6P9G4 183 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 DOK3Q7L591 496 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 EPHX4Q8IUS5 362 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 KRTCAP2Q8N6L1 136 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 FNDC5Q8NAU1 212 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 OR4A15Q8NGL6 344 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 LRRC58Q96CX6 371 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 TIMD4Q96H15 378 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 C1orf50Q9BV19 199 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 C1QTNF5Q9BXJ0 243 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 DPY30Q9C005 99 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 GPR35Q9HC97 309 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 ZDHHC2Q9UIJ5 367 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 PRDM4Q9UKN5 801 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 FZR1Q9UM11 496 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 RCE1Q9Y256 329 aa10.75□□□□□ -0.69
DDX41-215ENST00000512431 ZNF503-AS2A6NEH8 195 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 CLDN25C9JDP6 229 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 TPD52L2O43399 206 aaKnown RBP10.74□□□□□ -0.69
DDX41-215ENST00000512431 NCR1O76036 304 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 TFPTP0C1Z6 253 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 ZNF35P13682 527 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 IL7RP16871 459 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 GCH1P30793 250 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 P2RY4P51582 365 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 COPZ1P61923 177 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 CKAP4Q07065 602 aaKnown RBP10.74□□□□□ -0.69
DDX41-215ENST00000512431 EPS8Q12929 822 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 C1DQ13901 141 aaKnown RBP10.74□□□□□ -0.69
DDX41-215ENST00000512431 MSMPQ1L6U9 139 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 PCGF3Q3KNV8 242 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 ALKBH6Q3KRA9 238 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 ARMCX4Q5H9R4 360 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 IL23RQ5VWK5 629 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 SAXO2Q658L1 398 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 LRP11Q86VZ4 500 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 ZNF440Q8IYI8 595 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 CLECL1Q8IZS7 167 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 PIK3C3Q8NEB9 887 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 SNX33Q8WV41 574 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 RAB1CQ92928 201 aa10.74□□□□□ -0.69
DDX41-215ENST00000512431 DVL3Q92997 716 aaPredicted RBP10.74□□□□□ -0.69
DDX41-215ENST00000512431 GRPEL1Q9HAV7 217 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms