RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 GSTA4O15217 222 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 SLC22A2O15244 555 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 TPST1O60507 370 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 CCDC22O60826 627 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 KRT34O76011 436 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 MFN2O95140 757 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 LGI1O95970 557 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 PAX7P23759 505 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 EDNRAP25101 427 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 HTR2AP28223 471 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 PTH2RP49190 550 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 SELENOPP49908 381 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 TAS2R41P59536 307 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 DMTNQ08495 405 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 SELPLGQ14242 412 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 ADRM1Q16186 407 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 GABRA6Q16445 453 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 VMACQ2NL98 169 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 GLIPR1L2Q4G1C9 344 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 C1QTNF12Q5T7M4 302 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 REP15Q6BDI9 236 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 NANOGP8Q6NSW7 305 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF613Q6PF04 617 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 TTC33Q6PID6 262 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-232ENST00000489053 C6orf89Q6UWU4 347 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 ARPINQ7Z6K5 226 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 BIVMQ86UB2 503 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 C10orf111Q8N326 155 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 PIK3C3Q8NEB9 887 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 LZICQ8WZA0 190 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 TAAR8Q969N4 342 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 C18orf12Q96KH6 178 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 ADAD1Q96M93 576 aaKnown RBP8.03□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF385AQ96PM9 386 aaKnown RBP8.03□□□□□ -1.12
HDAC6-232ENST00000489053 ALKBH3Q96Q83 286 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-232ENST00000489053 TMEM204Q9BSN7 226 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 PRR14Q9BWN1 585 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 GSX2Q9BZM3 304 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 FAM107BQ9H098 131 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF385DQ9H6B1 395 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 NANOGQ9H9S0 305 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 BARX1Q9HBU1 254 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-232ENST00000489053 OBP2BQ9NPH6 170 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 RCE1Q9Y256 329 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 AP3M1Q9Y2T2 418 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 SH3GLB1Q9Y371 365 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 CHST2Q9Y4C5 530 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 PRRC2AP48634 2157 aaKnown RBP8.03□□□□□ -1.12
HDAC6-232ENST00000489053 A0A087WUJ7 227 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 TRAPPC13A5PLN9 417 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 DPRXA6NFQ7 191 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 VSTM5A8MXK1 200 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 KPNA4O00629 521 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-232ENST00000489053 NDUFAB1O14561 156 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 CHP2O43745 196 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 NPIPB7O75200 414 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ENTPD5O75356 428 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 GMNNO75496 209 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 MT-ATP6P00846 226 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ITGA5P08648 1049 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 INHBBP09529 407 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ADORA3P0DMS8 318 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 PTNP21246 168 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 CD40P25942 277 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 LOXP28300 417 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-232ENST00000489053 MDH1P40925 334 aaKnown RBP8.02□□□□□ -1.13
HDAC6-232ENST00000489053 FABP6P51161 128 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 CDH12P55289 794 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ROR2Q01974 943 aaKnown RBP8.02□□□□□ -1.13
HDAC6-232ENST00000489053 POU3F1Q03052 451 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-232ENST00000489053 CHRNB3Q05901 458 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 PUDPQ08623 228 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 VEZF1Q14119 521 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ETFDHQ16134 617 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 LRRC23Q53EV4 343 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-232ENST00000489053 HIKESHIQ53FT3 197 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 RABL3Q5HYI8 236 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ENTPD8Q5MY95 495 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 CARD17Q5XLA6 110 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 PRSS57Q6UWY2 283 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 CLEC9AQ6UXN8 241 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 DEF8Q6ZN54 512 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 PTOV1Q86YD1 416 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 KDM8Q8N371 416 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 SCAIQ8N9R8 606 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ADPRHL1Q8NDY3 354 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 OR2T12Q8NG77 320 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 OR6N1Q8NGY5 312 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 OR6S1Q8NH40 331 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 TPD52L3Q96J77 140 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 MPP4Q96JB8 637 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 MUS81Q96NY9 551 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF317Q96PQ6 595 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ARHGDIGQ99819 225 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 TMEM43Q9BTV4 400 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 SAR1AQ9NR31 198 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 SLC17A5Q9NRA2 495 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF446Q9NWS9 450 aa8.02□□□□□ -1.13
HDAC6-232ENST00000489053 NOX1Q9Y5S8 564 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms