RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZNF587Q96SQ5 575 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-209ENST00000484305 B3GAT1Q9P2W7 334 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 CAPN7Q9Y6W3 813 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 MTORP42345 2549 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 CPSF4LA6NMK7 179 aaKnown RBP11.32□□□□□ -0.6
HDAC1-209ENST00000484305 SHISA9B4DS77 424 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 MS4A18H0YCH9 400 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 AIM2O14862 343 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 FMO6PO60774 539 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 BGLAPP02818 100 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 THY1P04216 161 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF43P17038 809 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 CDH2P19022 906 aaPredicted RBP11.32□□□□□ -0.6
HDAC1-209ENST00000484305 MPGP29372 298 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF83P51522 516 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 CLDN17P56750 224 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 SLC25A3Q00325 362 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 MS4A18Q3C1V0 323 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
HDAC1-209ENST00000484305 Q5PR19 223 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 SHEQ5VZ18 495 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF613Q6PF04 617 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 LINC00114Q6XXX2 140 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 H1FNTQ75WM6 255 aaPredicted RBP11.32□□□□□ -0.6
HDAC1-209ENST00000484305 LINGO2Q7L985 606 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 SSX8Q7RTT4 187 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 PCYOX1LQ8NBM8 494 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 FBXW5Q969U6 566 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 RCN3Q96D15 328 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 PERPQ96FX8 193 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 MOGAT1Q96PD6 335 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 C1QTNF6Q9BXI9 259 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 DLL4Q9NR61 685 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 SLC17A5Q9NRA2 495 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 GID8Q9NWU2 228 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 LAMP3Q9UQV4 416 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 B3GALT5Q9Y2C3 310 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 PLCE1Q9P212 2302 aa11.32□□□□□ -0.6
HDAC1-209ENST00000484305 LRRN3E7EW58 273 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 ABCD4O14678 606 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 SLC22A2O15244 555 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 ARHGEF9O43307 516 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 CHP2O43745 196 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 UPK3AO75631 287 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 KRT33AO76009 404 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF432O94892 652 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 LYPD3O95274 346 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 HPRP00739 348 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 SOD3P08294 240 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 DANCRP0C864 163 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 TGFBR3Q03167 851 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 VEZF1Q14119 521 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
HDAC1-209ENST00000484305 WDR88Q6ZMY6 472 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 C17orf78Q8N4C9 275 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 C1orf162Q8NEQ5 155 aaPredicted RBP11.31□□□□□ -0.6
HDAC1-209ENST00000484305 OR6S1Q8NH40 331 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 RP9Q8TA86 221 aaKnown RBP11.31□□□□□ -0.6
HDAC1-209ENST00000484305 ADAMTS16Q8TE57 1224 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 TMEM171Q8WVE6 324 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 SLC41A3Q96GZ6 507 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 ALKBH3Q96Q83 286 aaPredicted RBP11.31□□□□□ -0.6
HDAC1-209ENST00000484305 EPYCQ99645 322 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 TMEM43Q9BTV4 400 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 GSX2Q9BZM3 304 aa11.31□□□□□ -0.6
HDAC1-209ENST00000484305 LOC102725191A0A1B0GVB3 256 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF587BE7ETH6 402 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 M0R1B8 84 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 COX4I1P13073 169 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 HLA-DOBP13765 273 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 NQO1P15559 274 aaKnown RBP11.3□□□□□ -0.6
HDAC1-209ENST00000484305 TNFRSF1BP20333 461 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 PTAFRP25105 342 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 PTH2RP49190 550 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 SEC24CP53992 1094 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 SPOCK1Q08629 439 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 C1DQ13901 141 aaKnown RBP11.3□□□□□ -0.6
HDAC1-209ENST00000484305 MFSD13AQ14CX5 517 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 PGGHGQ32M88 737 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 HIKESHIQ53FT3 197 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 ERICH5Q6P6B1 374 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 KLHL17Q6TDP4 642 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 TMEM108Q6UXF1 575 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 ABHD12BQ7Z5M8 362 aaPredicted RBP11.3□□□□□ -0.6
HDAC1-209ENST00000484305 C10orf53Q8N6V4 93 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 ADPRHL1Q8NDY3 354 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 SMAP2Q8WU79 429 aaPredicted RBP11.3□□□□□ -0.6
HDAC1-209ENST00000484305 RASSF5Q8WWW0 418 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 PROX1Q92786 737 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 BOD1Q96IK1 185 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 ASPNQ9BXN1 380 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 LINC00470Q9BZP3 86 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 PCDHAC1Q9H158 963 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 CMTM6Q9NX76 183 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 CISD1Q9NZ45 108 aaKnown RBP11.3□□□□□ -0.6
HDAC1-209ENST00000484305 GMPR2Q9P2T1 348 aaKnown RBP11.3□□□□□ -0.6
HDAC1-209ENST00000484305 SLC7A7Q9UM01 511 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 RCE1Q9Y256 329 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 AMDHD2Q9Y303 409 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms