RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	FAM156A	Q8NDB6	213 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	OR5D16	Q8NGK9	328 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	NFKBID	Q8NI38	313 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	RNF128	Q8TEB7	428 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	SLC38A5	Q8WUX1	472 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	OSTF1	Q92882	214 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	RAB8B	Q92930	207 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	EFHD2	Q96C19	240 aa	Predicted RBP	10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	C16orf58	Q96GQ5	468 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	TMEM19	Q96HH6	336 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	PRR14	Q9BWN1	585 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	SERHL2	Q9H4I8	314 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	ARMC7	Q9H6L4	198 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	ANKRA2	Q9H9E1	313 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	BCL2L10	Q9HD36	194 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	IFT52	Q9Y366	437 aa		10.82	□□□□□ -0.68
SBF1-208	ENST00000477234	ACOT8	O14734	319 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	PGM3	O95394	542 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	GPI	P06744	558 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	ERCC1	P07992	297 aa	Predicted RBP	10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	APOBEC3A	P31941	199 aa	Predicted RBP	10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	KDELR2	P33947	212 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	EIF1	P41567	113 aa	Known RBP	10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	ZNF41	P51814	821 aa	Predicted RBP	10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	PSG6	Q00889	435 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	DUSP5	Q16690	384 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	ZSWIM7	Q19AV6	140 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	ZFP1	Q6P2D0	407 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	SHISA2	Q6UWI4	295 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	CCDC80	Q76M96	950 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	SPATA24	Q86W54	205 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	OR5M1	Q8NGP8	315 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	FBXO30	Q8TB52	745 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	CDS1	Q92903	461 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	MAL2	Q969L2	176 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	C3orf49	Q96BT1	292 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	RSRC1	Q96IZ7	334 aa	Known RBP	10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	ADGRG7	Q96K78	797 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	HOXD1	Q9GZZ0	328 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	PCDHAC1	Q9H158	963 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	YY1AP1	Q9H869	796 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	EVA1A	Q9H8M9	152 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	MTHFD2L	Q9H903	347 aa	Predicted RBP	10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	KLHL9	Q9P2J3	617 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	ZNF232	Q9UNY5	417 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	WDR45	Q9Y484	360 aa		10.81	□□□□□ -0.68
SBF1-208	ENST00000477234	ARFGEF3	Q5TH69	2177 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	OR5H1	A6NKK0	313 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234		E7EQL1	145 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	TNFSF11	O14788	317 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	FKBP6	O75344	327 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	H6PD	O95479	791 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	IL33	O95760	270 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	NUDT7	P0C024	238 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	PSMA4	P25789	261 aa	Known RBP	10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	ELK4	P28324	431 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	MSX2	P35548	267 aa	Predicted RBP	10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	PCBP3	P57721	371 aa	Known RBP	10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	MS4A2	Q01362	244 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	KPNB1	Q14974	876 aa	Known RBP	10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	SYPL1	Q16563	259 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	LRRC23	Q53EV4	343 aa	Predicted RBP	10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	AP1AR	Q63HQ0	302 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	PEX5L	Q8IYB4	626 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	C10orf111	Q8N326	155 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	ZNF527	Q8NB42	609 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	FAM110B	Q8TC76	370 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	KLHL15	Q96M94	604 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	SDF2	Q99470	211 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	ZNF350	Q9GZX5	532 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	DCAF13	Q9NV06	445 aa	Known RBP	10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	BAG5	Q9UL15	447 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	VDAC3	Q9Y277	283 aa		10.8	□□□□□ -0.68
SBF1-208	ENST00000477234	KCNK2	O95069	426 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	ANGPTL1	O95841	491 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	NCK1	P16333	377 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	CD40	P25942	277 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	OR3A2	P47893	321 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	SNRPD2	P62316	118 aa	Known RBP	10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	ELF3	P78545	371 aa	Predicted RBP	10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	LARS2	Q15031	903 aa	Known RBP	10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	TSC22D1	Q15714	1073 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	ZNF239	Q16600	458 aa	Known RBP	10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	FAM98B	Q52LJ0	330 aa	Known RBP	10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	OR7E24	Q6IFN5	339 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	CYP2R1	Q6VVX0	501 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	CBLL1	Q75N03	491 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	EIF3M	Q7L2H7	374 aa	Known RBP	10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	FCRLA	Q7L513	359 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	ARMC8	Q8IUR7	673 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	MISP	Q8IVT2	679 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	TUSC5	Q8IXB3	177 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	ANKFN1	Q8N957	763 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	SEMA6D	Q8NFY4	1073 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	SAP130	Q9H0E3	1048 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	SLC13A4	Q9UKG4	626 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	PCDHB10	Q9UN67	800 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	USP22	Q9UPT9	525 aa		10.79	□□□□□ -0.68
SBF1-208	ENST00000477234	GPC6	Q9Y625	555 aa	Predicted RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms