RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 NME1P15531 152 aaKnown RBP12.71□□□□□ -0.37
HDAC1-206ENST00000476391 RGS8P57771 180 aaPredicted RBP12.71□□□□□ -0.37
HDAC1-206ENST00000476391 KRBOX4Q5JUW0 171 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 PIP5KL1Q5T9C9 394 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 LIPNQ5VXI9 398 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 SLCO4C1Q6ZQN7 724 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 TPGS1Q6ZTW0 290 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF614Q8N883 585 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 OR2G2Q8NGZ5 317 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 C3orf49Q96BT1 292 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 SAMD8Q96LT4 415 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 GFI1Q99684 422 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 RIOK2Q9BVS4 552 aaKnown RBP12.71□□□□□ -0.37
HDAC1-206ENST00000476391 POFUT1Q9H488 388 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 MED20Q9H944 212 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 LPAR3Q9UBY5 353 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 PISDQ9UG56 409 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 OR5V1Q9UGF6 321 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 V9GY05 133 aa12.71□□□□□ -0.37
HDAC1-206ENST00000476391 A0A087X0M5 115 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 A0A1B0GX30 115 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 TMEM88BA6NKF7 163 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 SAP18O00422 153 aaKnown RBP12.71□□□□□ -0.38
HDAC1-206ENST00000476391 TGFB1P01137 390 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 FGBP02675 491 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 MMP3P08254 477 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 GPR4P46093 362 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 CRYBB1P53674 252 aaPredicted RBP12.71□□□□□ -0.38
HDAC1-206ENST00000476391 CXCL9Q07325 125 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 IRF4Q15306 451 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 NSUN5P2Q63ZY6 315 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 DPPA2Q7Z7J5 298 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 HS6ST3Q8IZP7 471 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 OR56A3Q8NH54 315 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 SOX7Q9BT81 388 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 ADGRL4Q9HBW9 690 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 DUSP22Q9NRW4 184 aa12.71□□□□□ -0.38
HDAC1-206ENST00000476391 SIRT3Q9NTG7 399 aaPredicted RBP12.71□□□□□ -0.38
HDAC1-206ENST00000476391 ARL5CA6NH57 179 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 TBX19O60806 448 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 HLA-GP17693 338 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 RAB4AP20338 218 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 CEACAM6P40199 344 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 STXBP1P61764 594 aaKnown RBP12.7□□□□□ -0.38
HDAC1-206ENST00000476391 FOXO1Q12778 655 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 LRRC37A5PQ49AS3 106 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 ETV3LQ6ZN32 361 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 MAMDC2Q7Z304 686 aaPredicted RBP12.7□□□□□ -0.38
HDAC1-206ENST00000476391 OR6K2Q8NGY2 324 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 SUN3Q8TAQ9 357 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 SLC2A12Q8TD20 617 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 NEIL2Q969S2 332 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 MOGAT1Q96PD6 335 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 C1QTNF2Q9BXJ5 285 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 POMT1Q9Y6A1 747 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.7□□□□□ -0.38
HDAC1-206ENST00000476391 CLTBP09497 229 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 PRKXP51817 358 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 EPHB3P54753 998 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF280AP59817 542 aaPredicted RBP12.7□□□□□ -0.38
HDAC1-206ENST00000476391 RPS15P62841 145 aaKnown RBP12.7□□□□□ -0.38
HDAC1-206ENST00000476391 RPS24P62847 133 aaKnown RBP12.7□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF177Q13360 481 aaPredicted RBP12.7□□□□□ -0.38
HDAC1-206ENST00000476391 DHCR24Q15392 516 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 DEFB115Q30KQ5 88 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 IER5LQ5T953 404 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 ADAM5Q6NVV9 412 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 MBOAT2Q6ZWT7 520 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 GPBAR1Q8TDU6 330 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 MISP3Q96FF7 219 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 SLC25A21Q9BQT8 299 aaPredicted RBP12.7□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF559Q9BR84 538 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 NOX4Q9NPH5 578 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 HAO2Q9NYQ3 351 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 PIAS3Q9Y6X2 628 aa12.7□□□□□ -0.38
HDAC1-206ENST00000476391 CXorf65A6NEN9 183 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 XRCC3O43542 346 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 MRPL3P09001 348 aaKnown RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 PAX1P15863 534 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 ATP1B3P54709 279 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 RHOAP61586 193 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 BIKQ13323 160 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 ATXN7L3Q14CW9 347 aaPredicted RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 C21orf62-AS1Q17RA5 79 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 FIGNL1Q6PIW4 674 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 TGIF2LXQ8IUE1 241 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 NRMQ8IXM6 262 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 MMP21Q8N119 569 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SYS1Q8N2H4 156 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 OR6X1Q8NH79 312 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 FBXO32Q969P5 355 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SMIM8Q96KF7 97 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 ASB16Q96NS5 453 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 PIGQQ9BRB3 760 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF426Q9BUY5 554 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms