RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 METAP1P53582 386 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 GLB1L2Q8IW92 636 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 BEST3Q8N1M1 668 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 OR4K13Q8NH42 304 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 LMLNQ96KR4 655 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 SULT1C2O00338 296 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 SULT1B1O43704 296 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 AIFM1O95831 613 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 BLOC1S1P78537 153 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
NPHP4-207ENST00000470763 JMJD6Q6NYC1 403 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-207ENST00000470763 RBMS3Q6XE24 437 aaKnown RBP12.62□□□□□ -0.39
NPHP4-207ENST00000470763 TMPRSS9Q7Z410 1059 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 TMED4Q7Z7H5 227 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 OR52E2Q8NGJ4 325 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 SFXN5Q8TD22 340 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 GLYATL2Q8WU03 294 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 TFGQ92734 400 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-207ENST00000470763 CMTM3Q96MX0 182 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 TMEM231Q9H6L2 316 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 CACYBPQ9HB71 228 aaKnown RBP12.62□□□□□ -0.39
NPHP4-207ENST00000470763 WDR45Q9Y484 360 aa12.62□□□□□ -0.39
NPHP4-207ENST00000470763 OR6C76A6NM76 312 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 IMPA2O14732 288 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 GTF2F2P13984 249 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 NPBWR1P48145 328 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 REEP5Q00765 189 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 LY6G6FQ5SQ64 297 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 FAM111BQ6SJ93 734 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 GRHL3Q8TE85 626 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 VRK1Q99986 396 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 SCN5AQ14524 2016 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 TRAPPC13A5PLN9 417 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 NDUFS1P28331 727 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 FAUP35544 74 aaKnown RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 OR1Q1Q15612 314 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 PRAMEF8Q5VWM4 474 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 PRAMEF7Q5VXH5 474 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 RAB12Q6IQ22 244 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 H3F3CQ6NXT2 135 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 RPL22L1Q6P5R6 122 aaKnown RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 TMEM71Q6P5X7 295 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 CCDC36Q8IYA8 594 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 SPAG16Q8N0X2 631 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 RXFP4Q8TDU9 374 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 ZNRF4Q8WWF5 429 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 TNFRSF13CQ96RJ3 184 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 CALML5Q9NZT1 146 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 LRIT2A6NDA9 550 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 CCSO14618 274 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 TO15178 435 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 KCNAB3O43448 404 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 RPP14O95059 124 aaKnown RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 CXCL14O95715 111 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 RAB40ALP0C0E4 278 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 CSNK2A2P19784 350 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 CERS1P27544 350 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 NANOS3P60323 173 aaKnown RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 SNRPEP62304 92 aaKnown RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 SNTB1Q13884 538 aaKnown RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF600Q6ZNG1 722 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 TMPRSS12Q86WS5 348 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 SLC35F2Q8IXU6 374 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 RAB40AQ8WXH6 277 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 RGP1Q92546 391 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 MIB2Q96AX9 1013 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 SEC22AQ96IW7 307 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 FAM117AQ9C073 453 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 TINAGL1Q9GZM7 467 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-207ENST00000470763 TLNRD1Q9H1K6 362 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 POFUT1Q9H488 388 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 PELI2Q9HAT8 420 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 IL23AQ9NPF7 189 aa12.61□□□□□ -0.39
NPHP4-207ENST00000470763 LRRK1Q38SD2 2015 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 ALPK2Q86TB3 2170 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 ABLIM3O94929 683 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 NFYBP25208 207 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 RORAP35398 523 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 GPR1P46091 355 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 MRPS10P82664 201 aaKnown RBP12.6□□□□□ -0.39
NPHP4-207ENST00000470763 TAF13Q15543 124 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 PAN3Q58A45 887 aaKnown RBP12.6□□□□□ -0.39
NPHP4-207ENST00000470763 UNQ6126/PRO20091Q6UXV3 157 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 GAREM2Q75VX8 874 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 RANBP3LQ86VV4 465 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-207ENST00000470763 CDK20Q8IZL9 346 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF764Q96H86 408 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-207ENST00000470763 CNN2Q99439 309 aaKnown RBP12.6□□□□□ -0.39
NPHP4-207ENST00000470763 OR52A5Q9H2C5 316 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 KCNK15Q9H427 330 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 MEPEQ9NQ76 525 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-207ENST00000470763 GSN-AS1Q9NRJ2 163 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 MYEF2Q9P2K5 600 aaKnown RBP12.6□□□□□ -0.39
NPHP4-207ENST00000470763 FBXO4Q9UKT5 387 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
NPHP4-207ENST00000470763 A0A1B0GVT2 93 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms