RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	TIGD4	Q8IY51	512 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	FITM2	Q8N6M3	262 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	BCORP1	Q8N888	145 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZNF441	Q8N8Z8	693 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	POGLUT1	Q8NBL1	392 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SLC16A11	Q8NCK7	471 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	BPIFC	Q8NFQ6	507 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	OR5D16	Q8NGK9	328 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	OR13C3	Q8NGS6	347 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	OR52J3	Q8NH60	311 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	BBS10	Q8TAM1	723 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CPT1C	Q8TCG5	803 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	TSEN15	Q8WW01	171 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	PIK3R3	Q92569	461 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	PROX1	Q92786	737 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	RAB8B	Q92930	207 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	LRRC58	Q96CX6	371 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	RNF125	Q96EQ8	232 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SLC35A4	Q96G79	324 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	AURKB	Q96GD4	344 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	COL21A1	Q96P44	957 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ADO	Q96SZ5	270 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	HOPX	Q9BPY8	73 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ECSIT	Q9BQ95	431 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	HOXD1	Q9GZZ0	328 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SLC25A18	Q9H1K4	315 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	RIMS4	Q9H426	269 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	METTL7A	Q9H8H3	244 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	HHATL	Q9HCP6	504 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	NGB	Q9NPG2	151 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SLC52A3	Q9NQ40	469 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KLHL1	Q9NR64	748 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZNF275	Q9NSD4	429 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SACM1L	Q9NTJ5	587 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	PLCXD1	Q9NUJ7	323 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	UFSP2	Q9NUQ7	469 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KLRF1	Q9NZS2	232 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CALML5	Q9NZT1	146 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CNIH4	Q9P003	139 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	MRPL15	Q9P015	296 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	VAPA	Q9P0L0	249 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	P2RX2	Q9UBL9	471 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	WARS2	Q9UGM6	360 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	NUP50	Q9UKX7	468 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	RNF24	Q9Y225	148 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KLF13	Q9Y2Y9	288 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	PUS1	Q9Y606	427 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	AP4B1	Q9Y6B7	739 aa		5.62	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZNF98	A6NK75	572 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CCT8L1P	A6NM43	557 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ATP6V1G2-DDX39B	F2Z307	99 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638		H3BNH8	94 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SCD	O00767	359 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SLC16A6	O15403	523 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CLOCK	O15516	846 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SLC28A2	O43868	658 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	TSPAN2	O60636	221 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	STX11	O75558	287 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SLC25A12	O75746	678 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KCNK2	O95069	426 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	UNC5C	O95185	931 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	TGFA	P01135	160 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CRYAB	P02511	175 aa	Known RBP	5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	BCHE	P06276	602 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	SP1	P08047	785 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	STS	P08842	583 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	COX5B	P10606	129 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	THRB	P10828	461 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ETFA	P13804	333 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CD1E	P15812	388 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	GPX2	P18283	190 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	PI3	P19957	117 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CNR1	P21554	472 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	GIF	P27352	417 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	PTPN6	P29350	595 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CD79B	P40259	229 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	GPR4	P46093	362 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	GSS	P48637	474 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	TNFSF10	P50591	281 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CEBPG	P53567	150 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CRISP3	P54108	245 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	FBXW4	P57775	412 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	MTPN	P58546	118 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	GNG2	P59768	71 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	PLGLB1	Q02325	96 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	RBBP4	Q09028	425 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KLRB1	Q12918	225 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	GPR176	Q14439	515 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZNF169	Q14929	603 aa	Predicted RBP	5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	GPR68	Q15743	365 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	USF2	Q15853	346 aa	Predicted RBP	5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	NTRK2	Q16620	822 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CYP51A1	Q16850	503 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZNF630	Q2M218	657 aa	Predicted RBP	5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZNF791	Q3KP31	576 aa	Predicted RBP	5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ARHGAP11B	Q3KRB8	267 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZMAT1	Q5H9K5	638 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZNF766	Q5HY98	468 aa		5.61	□□□□□ -1.51
ECHDC1-208	ENST00000436638	LCN1P1	Q5VSP4	162 aa		5.61	□□□□□ -1.51

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