RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 LRRC46Q96FV0 321 aa17.06■□□□□ 0.32
HOXA9-202ENST00000396345 DHRS1Q96LJ7 313 aa17.06■□□□□ 0.32
HOXA9-202ENST00000396345 C20orf141Q9NUB4 165 aa17.06■□□□□ 0.32
HOXA9-202ENST00000396345 ZNF229Q9UJW7 825 aa17.06■□□□□ 0.32
HOXA9-202ENST00000396345 AURKCQ9UQB9 309 aa17.06■□□□□ 0.32
HOXA9-202ENST00000396345 HECTD1Q9ULT8 2610 aa17.06■□□□□ 0.32
HOXA9-202ENST00000396345 HTR3EA5X5Y0 456 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 A8MXE2 369 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 CIB2O75838 187 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 OR7A10O76100 309 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 HIST1H2ABP04908 130 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 RAP2AP10114 183 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 IFI30P13284 250 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 FUT1P19526 365 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 LSM11P83369 360 aaKnown RBP eCLIP17.05■□□□□ 0.32
HOXA9-202ENST00000396345 IL1RL1Q01638 556 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 GABPB1Q06547 395 aaPredicted RBP17.05■□□□□ 0.32
HOXA9-202ENST00000396345 FBXL19-AS1Q494R0 122 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 PODNL1Q6PEZ8 512 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 TBPL2Q6SJ96 375 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 MBOAT2Q6ZWT7 520 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 HIST3H2AQ7L7L0 130 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 RRM2BQ7LG56 351 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 SLC46A3Q7Z3Q1 461 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 NRMQ8IXM6 262 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 KDM8Q8N371 416 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 LRRC17Q8N6Y2 441 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 SLC7A13Q8TCU3 470 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 CANT1Q8WVQ1 401 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 HIST1H2ACQ93077 130 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 OXGR1Q96P68 337 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 RBM24Q9BX46 236 aaKnown RBP17.05■□□□□ 0.32
HOXA9-202ENST00000396345 NOSIPQ9Y314 301 aaKnown RBP17.05■□□□□ 0.32
HOXA9-202ENST00000396345 FLVCR1Q9Y5Y0 555 aa17.05■□□□□ 0.32
HOXA9-202ENST00000396345 HCFC1P51610 2035 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 TRBV4-1A0A0J9YWV2 114 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 TCRBV3S1A0A5B6 114 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 MS4A18H0YCH9 400 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 PLPP3O14495 311 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 OR6A2O95222 327 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 GADD45GO95257 159 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 GRNP28799 593 aaKnown RBP17.04■□□□□ 0.32
HOXA9-202ENST00000396345 RRM2P31350 389 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 PRKCDQ05655 676 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 POU4F3Q15319 338 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 MS4A18Q3C1V0 323 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 C1orf146Q5VVC0 180 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 ZNF474Q6S9Z5 364 aaPredicted RBP17.04■□□□□ 0.32
HOXA9-202ENST00000396345 STK32CQ86UX6 486 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 RNASE6Q93091 150 aaKnown RBP17.04■□□□□ 0.32
HOXA9-202ENST00000396345 BPIFA2Q96DR5 249 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 PARPBPQ9NWS1 579 aa17.04■□□□□ 0.32
HOXA9-202ENST00000396345 PLEKHB1Q9UF11 243 aaPredicted RBP17.04■□□□□ 0.32
HOXA9-202ENST00000396345 LOC102725191A0A1B0GVB3 256 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 C19orf84I3L1E1 186 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 MRPL33O75394 65 aaKnown RBP17.03■□□□□ 0.32
HOXA9-202ENST00000396345 HPRP00739 348 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 ASAH2BP0C7U1 165 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 ADORA3P0DMS8 318 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 ZNF43P17038 809 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 HOXB6P17509 224 aaKnown RBP17.03■□□□□ 0.32
HOXA9-202ENST00000396345 UQCRC1P31930 480 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 OR3A2P47893 321 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 ERFP50548 548 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 PUDPQ08623 228 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 C1DQ13901 141 aaKnown RBP17.03■□□□□ 0.32
HOXA9-202ENST00000396345 SEC23BQ15437 767 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 TFAP2EQ6VUC0 442 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 CREB3L2Q70SY1 520 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 NANOGNBQ7Z5D8 188 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 EPHX4Q8IUS5 362 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 ZNF100Q8IYN0 542 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 CDK20Q8IZL9 346 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 ZIC4Q8N9L1 334 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 UTP4Q969X6 686 aaKnown RBP17.03■□□□□ 0.32
HOXA9-202ENST00000396345 TMEM45BQ96B21 275 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 RSRC1Q96IZ7 334 aaKnown RBP17.03■□□□□ 0.32
HOXA9-202ENST00000396345 CHID1Q9BWS9 393 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 NPDC1Q9NQX5 325 aaPredicted RBP17.03■□□□□ 0.32
HOXA9-202ENST00000396345 B3GAT1Q9P2W7 334 aa17.03■□□□□ 0.32
HOXA9-202ENST00000396345 FOXD3Q9UJU5 478 aaPredicted RBP17.03■□□□□ 0.32
HOXA9-202ENST00000396345 KRT36O76013 467 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 MAKP20794 623 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 AHCYP23526 432 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 NTF4P34130 210 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 EXOC3L2Q2M3D2 409 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 CASP12Q6UXS9 341 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 BEND4Q6ZU67 534 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.02■□□□□ 0.32
HOXA9-202ENST00000396345 YTHDF3Q7Z739 585 aaKnown RBP17.02■□□□□ 0.32
HOXA9-202ENST00000396345 MEX3DQ86XN8 651 aaKnown RBP17.02■□□□□ 0.32
HOXA9-202ENST00000396345 UEVLDQ8IX04 471 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 LIPHQ8WWY8 451 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 APH1AQ96BI3 265 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 ZNF385AQ96PM9 386 aaKnown RBP17.02■□□□□ 0.32
HOXA9-202ENST00000396345 ALPK1Q96QP1 1244 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 FUZQ9BT04 418 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 GALNT8Q9NY28 637 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 TAS2R5Q9NYW4 299 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 TMCC3Q9ULS5 477 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms