RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ANKRD46Q86W74 232 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 LONP2Q86WA8 852 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 KIRREL3Q8IZU9 778 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF561Q8N587 486 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 NELFBQ8WX92 580 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 FCGR1BQ92637 280 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 RFT1Q96AA3 541 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 RMND5BQ96G75 393 aaPredicted RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 PRRC1Q96M27 445 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC39A8Q9C0K1 460 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 OR51B6Q9H340 312 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 NEK6Q9HC98 313 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 DEPPQ9NTK1 212 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 NECAP2Q9NVZ3 263 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 MTCH1Q9NZJ7 389 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 TRPC4Q9UBN4 977 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 UBQLN1Q9UMX0 589 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 RNF24Q9Y225 148 aa1.54□□□□□ -2.16
SMARCAD1-202ENST00000359052 DNAH11Q96DT5 4516 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 DNAH2Q9P225 4427 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CROCCQ5TZA2 2017 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 NSG1A0A0A6YYJ2 146 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TUBAL3A6NHL2 446 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 NEDD8-MDP1E9PL57 170 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SYNGR1O43759 233 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 XPNPEP2O43895 674 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC25A12O75746 678 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GABARAPO95166 117 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TOMM40O96008 361 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ST6GAL1P15907 406 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GATA1P15976 413 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 IL7RP16871 459 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GOT1P17174 413 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 EIF2S2P20042 333 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 FPR3P25089 353 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SHC1P29353 583 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PRDX3P30048 256 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 COILP38432 576 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 NSG1P42857 185 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 VAMP7P51809 220 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 UBE2E1P51965 193 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 RIPPLY3P57055 190 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 FCHO2Q0JRZ9 810 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC10A2Q12908 348 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ART3Q13508 389 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TMEM132DQ14C87 1099 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 IGSF11Q5DX21 431 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF530Q6P9A1 599 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GCNT7Q6ZNI0 430 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SDIM1Q6ZPB5 146 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 LCNL1Q6ZST4 164 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 MRPL52Q86TS9 123 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 RIMKLAQ8IXN7 391 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CFAP206Q8IYR0 622 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 C9orf62Q8N4C0 152 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 COMMD1Q8N668 190 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 Q8N976 141 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 DUSP18Q8NEJ0 188 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PNPT1Q8TCS8 783 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TM9SF4Q92544 642 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SLC9A6Q92581 669 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 UBE2E3Q969T4 207 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ATP6V1G3Q96LB4 118 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 UBE2E2Q96LR5 201 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 RCHY1Q96PM5 261 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ERGIC2Q96RQ1 377 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 MCHR1Q99705 422 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 NAPBQ9H115 298 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ALX4Q9H161 411 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 C11orf49Q9H6J7 331 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 THSD1Q9NS62 852 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TMEM100Q9NV29 134 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GPATCH2LQ9NWQ4 482 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ABCD2Q9UBJ2 740 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SERTAD3Q9UJW9 196 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 NUP50Q9UKX7 468 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 LRBAP50851 2863 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 A0A1B0GU03 582 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZCWPW2A0A1B0GU75 182 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF729A6NN14 1252 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 H3BMQ9 156 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 MFAP3LO75121 409 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 PRKRAO75569 313 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 NR3C1P04150 777 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 RLN1P04808 185 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ZNF44P15621 663 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GJB2P29033 226 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 HOXD3P31249 432 aaPredicted RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ADCY8P40145 1251 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 GZMMP51124 257 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 ARPC4P59998 168 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SEC61BP60468 96 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 RPS7P62081 194 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 DR1Q01658 176 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 FOXI1Q12951 378 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 TRIP6Q15654 476 aaKnown RBP1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 SAXO2Q658L1 398 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CLEC18BQ6UXF7 455 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CYS1Q717R9 158 aa1.53□□□□□ -2.16
SMARCAD1-202ENST00000359052 CCDC190Q86UF4 302 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms