RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CREB3L2Q70SY1 520 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 HIST3H2AQ7L7L0 130 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 CYP4Z1Q86W10 505 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 UEVLDQ8IX04 471 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 RNF148Q8N7C7 305 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 HIST1H2ACQ93077 130 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 PIK3IP1Q96FE7 263 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 NSL1Q96IY1 281 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 HSH2DQ96JZ2 352 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 ZNF385AQ96PM9 386 aaKnown RBP16.96■□□□□ 0.31
SYNE4-202ENST00000340477 SLCO5A1Q9H2Y9 848 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 MRPL39Q9NYK5 338 aaKnown RBP16.96■□□□□ 0.31
SYNE4-202ENST00000340477 EGFL7Q9UHF1 273 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 RIMS3Q9UJD0 308 aa16.96■□□□□ 0.31
SYNE4-202ENST00000340477 FBN2P35556 2912 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 HRGP04196 525 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 UMPSP11172 480 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 TCN1P20061 433 aaPredicted RBP16.95■□□□□ 0.3
SYNE4-202ENST00000340477 IGHV1-2P23083 117 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 NR1H2P55055 460 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 ST3GAL3Q11203 375 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 PIN1Q13526 163 aaPredicted RBP16.95■□□□□ 0.3
SYNE4-202ENST00000340477 TSC22D1Q15714 1073 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 SPATS1Q496A3 300 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 GLYATQ6IB77 296 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 NIPAL3Q6P499 406 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 VTCN1Q7Z7D3 282 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 P2RY8Q86VZ1 359 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 CDC20BQ86Y33 519 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 DEFB107AQ8IZN7 70 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 BCAS4Q8TDM0 211 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 MUCL1Q96DR8 90 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 HS6ST2Q96MM7 605 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 CDRT15Q96T59 188 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 FKRPQ9H9S5 495 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 NANSQ9NR45 359 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 RCE1Q9Y256 329 aa16.95■□□□□ 0.3
SYNE4-202ENST00000340477 ZNF587BE7ETH6 402 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 RAD51DO75771 328 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 LYPD3O95274 346 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 CH25HO95992 272 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 HSD17B1P14061 328 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 CALB2P22676 271 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 EDNRAP25101 427 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 CLDN17P56750 224 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 PUDPQ08623 228 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 OR7E24Q6IFN5 339 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 WDR88Q6ZMY6 472 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 EPHX4Q8IUS5 362 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 KDM8Q8N371 416 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 OR5J2Q8NH18 312 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 MOGAT1Q96PD6 335 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 ZNF426Q9BUY5 554 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 FNDC11Q9BVV2 318 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 SEC14L4Q9UDX3 406 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 ZNF229Q9UJW7 825 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 MED31Q9Y3C7 131 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 NOX1Q9Y5S8 564 aa16.94■□□□□ 0.3
SYNE4-202ENST00000340477 TACC2O95359 2948 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 LRBAP50851 2863 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 LOC102725191A0A1B0GVB3 256 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 B2RBV5 119 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 SLC43A1O75387 559 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 THY1P04216 161 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 THBDP07204 575 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 ADORA3P0DMS8 318 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 AHCYP23526 432 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 POU3F1Q03052 451 aaPredicted RBP16.93■□□□□ 0.3
SYNE4-202ENST00000340477 ZNF74Q16587 644 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 TIMM23BQ5SRD1 257 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 TSPO2Q5TGU0 170 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 NANOGNBQ7Z5D8 188 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 TSPYL5Q86VY4 417 aaPredicted RBP16.93■□□□□ 0.3
SYNE4-202ENST00000340477 OFCC1Q8IZS5 231 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 ZNF433Q8N7K0 673 aaPredicted RBP16.93■□□□□ 0.3
SYNE4-202ENST00000340477 ZIC4Q8N9L1 334 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 TMEM239Q8WW34 195 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 SLC7A10Q9NS82 523 aa16.93■□□□□ 0.3
SYNE4-202ENST00000340477 FAM32AQ9Y421 112 aaKnown RBP16.93■□□□□ 0.3
SYNE4-202ENST00000340477 ENO4A6NNW6 628 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 DEFB108AA8MXU0 73 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 MT-ND1P03886 318 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 MPGP29372 298 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 NTF4P34130 210 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 SELENOPP49908 381 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 FOXD4Q12950 439 aaPredicted RBP16.92■□□□□ 0.3
SYNE4-202ENST00000340477 TRAM2Q15035 370 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 PPA1Q15181 289 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 TAB1Q15750 504 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 KLHL24Q6TFL4 600 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 ARHGAP24Q8N264 748 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 GPR137CQ8N3F9 429 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 FAM156AQ8NDB6 213 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 C1orf162Q8NEQ5 155 aaPredicted RBP16.92■□□□□ 0.3
SYNE4-202ENST00000340477 TMEM255BQ8WV15 326 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 SGTBQ96EQ0 304 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 NSMCE2Q96MF7 247 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 PRSS27Q9BQR3 290 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 AMBRA1Q9C0C7 1298 aa16.92■□□□□ 0.3
SYNE4-202ENST00000340477 ESRP2Q9H6T0 727 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms