RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZADH2Q8N4Q0 377 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 TCEAL7Q9BRU2 100 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 IER2Q9BTL4 223 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 GDE1Q9NZC3 331 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 RIMS3Q9UJD0 308 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 C17orf105B2RV13 164 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 BMPR1AP36894 532 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 VWA1Q6PCB0 445 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 FAM57BQ71RH2 274 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 IL17FQ96PD4 163 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 PREBQ9HCU5 417 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 DNPH1O43598 174 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 IL1RNP18510 177 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 GJA4P35212 333 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 CDKN2DP55273 166 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 TRA2BP62995 288 aaKnown RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 DUSP7Q16829 419 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 ADAMTS16Q8TE57 1224 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 ZNF764Q96H86 408 aaPredicted RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 AGPAT4Q9NRZ5 378 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 SPINT2O43291 252 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 EGFP01133 1207 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 BMP2P12643 396 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 TSSK4Q6SA08 328 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 SLC16A14Q7RTX9 510 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 OR1S2Q8NGQ3 325 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 LIN28AQ9H9Z2 209 aaKnown RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 BABAM2Q9NXR7 383 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 CD300AQ9UGN4 299 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 COL1A1P02452 1464 aaPredicted RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 ANTXRLA6NF34 631 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 MROH6A6NGR9 719 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 F5H697 171 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 KLRC4-KLRK1H3BQV0 150 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FGF4P08620 206 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 ZNF888P0CJ79 500 aaPredicted RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 RPS26P62854 115 aaKnown RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 GAB1Q13480 694 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 OR4A4PQ8NGN8 299 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 SLC29A1Q99808 456 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 ALG8Q9BVK2 526 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 INPP5EQ9NRR6 644 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 SLCO3A1Q9UIG8 710 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 ATP6V1G2-DDX39BF2Z307 99 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 HTN1P15515 57 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 MLF1P58340 268 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 RAP2BP61225 183 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 SELENOWP63302 87 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 KEAP1Q14145 624 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 VAMP3Q15836 100 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 CDKN3Q16667 212 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 TMEM97Q5BJF2 176 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 SLC30A7Q8NEW0 376 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 OR5D16Q8NGK9 328 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 BRIX1Q8TDN6 353 aaKnown RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 NAT6Q93015 286 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 STARD5Q9NSY2 213 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 MIA3Q5JRA6 1907 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 A0A0J9YY10 115 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 CYTIPO60759 359 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 CNR2P34972 360 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FRMPD2BQ6IN97 320 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 OR52B6Q8NGF0 335 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FAM174AQ8TBP5 190 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FAM3CQ92520 227 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 TMEM230Q96A57 120 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 ISG20Q96AZ6 181 aaKnown RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 PCDHGA9Q9Y5G4 932 aaKnown RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 NFS1Q9Y697 457 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 LTN1O94822 1766 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 HCRTO43612 131 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 KCNK2O95069 426 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 CSF2RAP15509 400 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 LAP3P28838 519 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 HOXC13P31276 330 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 SIM1P81133 766 aaPredicted RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 TBCEQ15813 527 aaPredicted RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 SLC6A19Q695T7 634 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 ZNF813Q6ZN06 617 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 LINC00696Q6ZRV3 163 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 LRP10Q7Z4F1 713 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 OR13J1Q8NGT2 312 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FAM72CH0Y354 149 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 MTCP1P56278 107 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FAM72AQ5TYM5 149 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FAM72DQ6L9T8 149 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FAM72BQ86X60 149 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 FUBP1Q96AE4 644 aaKnown RBP11.25□□□□□ -0.61
PCF11-201ENST00000298281 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 NUBP2Q9Y5Y2 271 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 RICTORQ6R327 1708 aa11.25□□□□□ -0.61
PCF11-201ENST00000298281 DTYMKP23919 212 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 TNFRSF4P43489 277 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 GPR176Q14439 515 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 ZNF626Q68DY1 528 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 NDRG3Q9UGV2 375 aa11.24□□□□□ -0.61
PCF11-201ENST00000298281 DNAJC15Q9Y5T4 150 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms