RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 BMP4P12644 408 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 F8A1P23610 371 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SDC2P34741 201 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 HOXD12P35452 270 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 RBM34P42696 430 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 CRYBB2P43320 205 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 P2RX1P51575 399 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 GPR85P60893 370 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 INSM1Q01101 510 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 FABP5Q01469 135 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 MC2RQ01718 297 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TEKQ02763 1124 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CBFBQ13951 182 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 OR7A5Q15622 319 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ETFDHQ16134 617 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZNF468Q5VIY5 522 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 FAM198BQ6UWH4 519 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 MDGA2Q7Z553 956 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 JAZF1Q86VZ6 243 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 NAXDQ8IW45 347 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZNF440Q8IYI8 595 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 KLHL36Q8N4N3 616 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TMEM156Q8N614 296 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 FAM71CQ8NEG0 241 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 OR11G2Q8NGC1 345 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 KISS1RQ969F8 398 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZNF775Q96BV0 537 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 TMCO6Q96DC7 493 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 C4orf36Q96KX1 117 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 DACH2Q96NX9 599 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 RASL10BQ96S79 203 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 EMC6Q9BV81 110 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CDADC1Q9BWV3 514 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 NUAK2Q9H093 628 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SYT4Q9H2B2 425 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TXNL4BQ9NX01 149 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 GALNT8Q9NY28 637 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 FOXJ2Q9P0K8 574 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 AKAP7Q9P0M2 348 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 PPP4R1LQ9P1A2 415 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 GRHPRQ9UBQ7 328 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CHRNA9Q9UGM1 479 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PADI1Q9ULC6 663 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SSR3Q9UNL2 185 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 MUC6Q6W4X9 2439 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 NSG1A0A0A6YYJ2 146 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 A0A1B0GTH9 108 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 A0A1B0GVC2 190 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 CCDC182A6NF36 153 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ANKRD61A6NGH8 418 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR6C70A6NIJ9 312 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 A6NIN4 97 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TTC36A6NLP5 189 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 FLRT2O43155 660 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 RAD1O60671 282 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 MRPS14O60783 128 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 AKR7A3O95154 331 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR6A2O95222 327 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TFP02787 698 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 IFI6P09912 130 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SBK2P0C263 348 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 KLK2P20151 261 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 AZGP1P25311 298 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 GTF2E2P29084 291 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 RFC3P40938 356 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 FOLR3P41439 243 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 RUNX1T1Q06455 604 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 FOXF1Q12946 379 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 PCOLCEQ15113 449 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 PON3Q15166 354 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 MOGQ16653 247 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZNF404Q494X3 552 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ARHGAP11AQ6P4F7 1023 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZNF322Q6U7Q0 402 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 USP43Q70EL4 1123 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 GPAT4Q86UL3 456 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 PM20D2Q8IYS1 436 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 NPEPL1Q8NDH3 523 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 C17orf47Q8NEP4 570 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR5L2Q8NGL0 311 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 OR5J2Q8NH18 312 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZNF417Q8TAU3 575 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SNX33Q8WV41 574 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SNRNP27Q8WVK2 155 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 UFD1Q92890 307 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 UBL7Q96S82 380 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZNF587Q96SQ5 575 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 ADAM19Q9H013 955 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 PLGRKTQ9HBL7 147 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 FGF20Q9NP95 211 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 NRIP3Q9NQ35 241 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ABCB10Q9NRK6 738 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 MALT1Q9UDY8 824 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 C19orf25Q9UFG5 118 aaPredicted RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 GNG8Q9UK08 70 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 COPS3Q9UNS2 423 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 EXOSC1Q9Y3B2 195 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 CEP250Q9BV73 2442 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 SPAARA0A1B0GVQ0 90 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TRIM64BA6NI03 449 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms