RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SELENONQ9NZV5 590 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 POU2F3Q9UKI9 436 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 ANGPT4Q9Y264 503 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 MAGED1Q9Y5V3 778 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC25A15Q9Y619 301 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 GMEB1Q9Y692 573 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 ABCA4P78363 2273 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 LOC100653049A0A140TA62 436 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 A0A1B0GWA3 101 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 TPST1O60507 370 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 TMCC2O75069 709 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 SERPINB7O75635 380 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 KRT34O76011 436 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 VAMP5O95183 116 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 PNMTP11086 282 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 PTNP21246 168 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 CBLP22681 906 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 PTAFRP25105 342 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 HTR2AP28223 471 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 RGS8P57771 180 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 SPOCK1Q08629 439 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 ALG10BQ5I7T1 473 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 NIPAL3Q6P499 406 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 DHRS4L2Q6PKH6 230 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 KLHL24Q6TFL4 600 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 CREB3L2Q70SY1 520 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 ARMC8Q8IUR7 673 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 KDM8Q8N371 416 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 ZIC4Q8N9L1 334 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 POMGNT2Q8NAT1 580 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 HIPK4Q8NE63 616 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 MFSD8Q8NHS3 518 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 TSPEARQ8WU66 669 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 C10orf82Q8WW14 230 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 MUS81Q96NY9 551 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 PIF1Q9H611 641 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 TMEM38AQ9H6F2 299 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 ZNF701Q9NV72 531 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 FAIMQ9NVQ4 179 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 ARMCX1Q9P291 453 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 KLHL14Q9P2G3 628 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 RASD1Q9Y272 281 aa11.16□□□□□ -0.62
NPLOC4-213ENST00000573519 FAM171A2A8MVW0 826 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 SHISA9B4DS77 424 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 PDLIM1O00151 329 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 NPIPB7O75200 414 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 DANCRP0C864 163 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 PAX1P15863 534 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 CD40P25942 277 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 MPGP29372 298 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 SELENOPP49908 381 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 P2RY4P51582 365 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 EGR4Q05215 589 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 LTBQ06643 244 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 LGALS3BPQ08380 585 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 PGGHGQ32M88 737 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 ABHD12BQ7Z5M8 362 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 SNX32Q86XE0 403 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 DEPDC4Q8N2C3 294 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 SMYD1Q8NB12 490 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 C11orf65Q8NCR3 313 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 BHLHE22Q8NFJ8 381 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 OR10A6Q8NH74 314 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 DNAJA4Q8WW22 397 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC38A4Q969I6 547 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 RADILQ96JH8 1075 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 COX4I2Q96KJ9 171 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 WFDC6Q9BQY6 131 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 PTDSS2Q9BVG9 487 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 TMEM27Q9HBJ8 222 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC17A5Q9NRA2 495 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 SEC14L4Q9UDX3 406 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 TESQ9UGI8 421 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 MGAT4BQ9UQ53 548 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 AMDHD2Q9Y303 409 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 NF1P21359 2839 aa11.15□□□□□ -0.62
NPLOC4-213ENST00000573519 TRAV36DV7A0A075B6V5 113 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 FTCDNL1E5RQL4 147 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 ZNF587BE7ETH6 402 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 MRASO14807 208 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 OR2T1O43869 369 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 LY6G6DO95868 133 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 OPN1SWP03999 348 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 ZNF43P17038 809 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 CLDN17P56750 224 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 PRPS1P60891 318 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 SLC25A3Q00325 362 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 DMTNQ08495 405 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 C1DQ13901 141 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 VEZF1Q14119 521 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 OR1Q1Q15612 314 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 CLEC12BQ2HXU8 276 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 TRMT5Q32P41 509 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 MMEL1Q495T6 779 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 HIKESHIQ53FT3 197 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 RABL3Q5HYI8 236 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 REP15Q6BDI9 236 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 NANOGP8Q6NSW7 305 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 ULK3Q6PHR2 472 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 C5orf46Q6UWT4 87 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms