RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 RDH16O75452 317 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 GIPP09681 153 aaPredicted RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 IFNGR1P15260 489 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 P2RY2P41231 377 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 MAP2K6P52564 334 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 FAM74A1Q5RGS3 127 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 AADACL4Q5VUY2 407 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 PXT1Q8NFP0 134 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 ZBTB8AQ96BR9 441 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 RASD2Q96D21 266 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 MMABQ96EY8 250 aaPredicted RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 LRRC46Q96FV0 321 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 SIGLEC11Q96RL6 698 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 SERINC2Q96SA4 455 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 G6PC3Q9BUM1 346 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 SLC17A9Q9BYT1 436 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 PRSS16Q9NQE7 514 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 PRTFDC1Q9NRG1 225 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 SIRT3Q9NTG7 399 aaPredicted RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 ACTR10Q9NZ32 417 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 NCDNQ9UBB6 729 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 FBXL4Q9UKA2 621 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 POMT2Q9UKY4 750 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 SCN4AP35499 1836 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 ARPC4-TTLL3A0A0A6YYG9 625 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 TMEM82A0PJX8 343 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 NPIPB8E9PQR5 432 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 DOK2O60496 412 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 CDK2P24941 298 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 PXNP49023 591 aaPredicted RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 ALG11Q2TAA5 492 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 ZNF770Q6IQ21 691 aaPredicted RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 UNQ6126/PRO20091Q6UXV3 157 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 SLC35D2Q76EJ3 337 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 DPY19L4Q7Z388 723 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 PM20D2Q8IYS1 436 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 BPIFB2Q8N4F0 458 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 SMIM4Q8WVI0 70 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 ARPC5LQ9BPX5 153 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 MRI1Q9BV20 369 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 TSPAN10Q9H1Z9 355 aaPredicted RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 OR52A5Q9H2C5 316 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 IL21RQ9HBE5 538 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 TMEM150CB9EJG8 249 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 M0QYG6 137 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 RNGTTO60942 597 aaKnown RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 HIST1H1CP16403 213 aaKnown RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 ZNF14P17017 642 aaPredicted RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 CEBPBP17676 345 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 IGFALSP35858 605 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 RPS27P42677 84 aaKnown RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 IL13RA1P78552 427 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 DYRK1AQ13627 763 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 CBFBQ13951 182 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 IRF4Q15306 451 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 LINC00303Q3SY05 128 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 TMPRSS9Q7Z410 1059 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 SLC51BQ86UW2 128 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 OR4D9Q8NGE8 314 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 ZC3HAV1LQ96H79 300 aaKnown RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 Q96M85 177 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 KLHL15Q96M94 604 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 CLDND1Q9NY35 253 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 SPHK1Q9NYA1 384 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 INSL6Q9Y581 213 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 MEIKINA0A087WXM9 373 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 A0A1B0GV50 99 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 CDC42EP2O14613 210 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 HPXP02790 462 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 UBBP0CG47 229 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 UBCP0CG48 685 aaKnown RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 AKT2P31751 481 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 MAGEB1P43366 347 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 GSG1Q2KHT4 349 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 Q499Y3 187 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 METRNLQ641Q3 311 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 OR5M1Q8NGP8 315 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 THRSPQ92748 146 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 ARL11Q969Q4 196 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 PPP1R14AQ96A00 147 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 ZFYVE21Q9BQ24 234 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 CHMP1AQ9HD42 196 aaPredicted RBP9.72□□□□□ -0.85
USB1-212ENST00000566082 SLC6A20Q9NP91 592 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 MEMO1Q9Y316 297 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 SEC16AO15027 2179 aa9.72□□□□□ -0.85
USB1-212ENST00000566082 RFXAPO00287 272 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 CCSO14618 274 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 DVL2O14641 736 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 GMDSO60547 372 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 AHSA1O95433 338 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 HCKP08631 526 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 NID1P14543 1247 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 SOX9P48436 509 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 MMP15P51511 669 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 RIDAP52758 137 aaKnown RBP9.71□□□□□ -0.85
USB1-212ENST00000566082 PRPS1P60891 318 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 TNFRSF17Q02223 184 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 BDH1Q02338 343 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 EEF1A2Q05639 463 aaKnown RBP9.71□□□□□ -0.85
USB1-212ENST00000566082 C1orf61Q13536 156 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms