RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 TMPRSS2O15393 492 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 HPXP02790 462 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 FGF4P08620 206 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 SAGP10523 405 aaPredicted RBP17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 PAX7P23759 505 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 ARFIP2P53365 341 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 SNTB2Q13425 540 aaKnown RBP17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 PCLAFQ15004 111 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 MSMPQ1L6U9 139 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 GPAT3Q53EU6 434 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 XKR7Q5GH72 579 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 ZCCHC23Q6ZST2 131 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 USP43Q70EL4 1123 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 CREB3L2Q70SY1 520 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 TRMT10CQ7L0Y3 403 aaKnown RBP17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 OR4A15Q8NGL6 344 aa17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 MAGEE2Q8TD90 523 aaPredicted RBP17.51■□□□□ 0.39
SQSTM1-215ENST00000514093 GAAP10253 952 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 G6PDP11413 515 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 CBR1P16152 277 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 P2RY4P51582 365 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 ARF1P84077 181 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 ROR2Q01974 943 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 BNIP2Q12982 314 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 DAG1Q14118 895 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 EPHX4Q8IUS5 362 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 FAM169BQ8N8A8 192 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 MIPOL1Q8TD10 442 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 MRPL37Q9BZE1 423 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 RACGAP1Q9H0H5 632 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 NOX3Q9HBY0 568 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 CRLF2Q9HC73 371 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 POLE3Q9NRF9 147 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 REV1Q9UBZ9 1251 aa17.5■□□□□ 0.39
SQSTM1-215ENST00000514093 TMEM229AB2RXF0 380 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 COPEO14579 308 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 TRIM13O60858 407 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 CPSF4O95639 269 aaKnown RBP17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 C1QCP02747 245 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 ANKRD46Q86W74 232 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 OR51F2Q8NH61 342 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 OIT3Q8WWZ8 545 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 JMJD8Q96S16 334 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 ESM1Q9NQ30 184 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 CMAHPQ9Y471 501 aa17.49■□□□□ 0.39
SQSTM1-215ENST00000514093 AGR2O95994 175 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 PNPP00491 289 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 GUSBP08236 651 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 CXCR1P25024 350 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 ALDH3B1P43353 468 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 LIMS1P48059 325 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 SEC24CP53992 1094 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 C4orf33Q8N1A6 199 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 KDM8Q8N371 416 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 YIPF5Q969M3 257 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 ZNF317Q96PQ6 595 aaPredicted RBP17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 SLC6A7Q99884 636 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 ZNF747Q9BV97 191 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 PIF1Q9H611 641 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 ZNF696Q9H7X3 374 aa17.48■□□□□ 0.39
SQSTM1-215ENST00000514093 PPIHO43447 177 aaKnown RBP17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 TFP02787 698 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 FAM153BP0C7A2 387 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 HOXB1P14653 301 aaPredicted RBP17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 CAPZA2P47755 286 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 LMO4P61968 165 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 HPCAP84074 193 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 MAD2L1BPQ15013 274 aaPredicted RBP17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 MDP1Q86V88 176 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 ANKFN1Q8N957 763 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 ZDHHC22Q8N966 263 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 RDH5Q92781 318 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 ZNF837Q96EG3 531 aaPredicted RBP17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 SYT3Q9BQG1 590 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 TAPBPLQ9BX59 468 aa17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 MOV10Q9HCE1 1003 aaKnown RBP17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 ZNF275Q9NSD4 429 aaPredicted RBP17.47■□□□□ 0.39
SQSTM1-215ENST00000514093 TRAV20A0A0B4J274 112 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 CFAP73A6NFT4 308 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 M0R233 179 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 SYNGR3O43761 229 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 SEC14L2O76054 403 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 CHRM4P08173 479 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 ADRA2CP18825 462 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 ACHEP22303 614 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 ALDH3A1P30838 453 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 ARR3P36575 388 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 MAP2K6P52564 334 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 CLDN8P56748 225 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 EPS8Q12929 822 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 SYPL1Q16563 259 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 SLC9B1Q4ZJI4 515 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 PRAMEF8Q5VWM4 474 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 PRAMEF7Q5VXH5 474 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 LRP11Q86VZ4 500 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 MRPL24Q96A35 216 aaKnown RBP17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 TUBGCP3Q96CW5 907 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 MECRQ9BV79 373 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 LINC00470Q9BZP3 86 aa17.46■□□□□ 0.39
SQSTM1-215ENST00000514093 G6PC2Q9NQR9 355 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms