RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 MCUR1Q96AQ8 359 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 PYURFQ96I23 114 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 A4GNTQ9UNA3 340 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 TUBAL3A6NHL2 446 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 ZNF814B7Z6K7 855 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 IGF2P01344 180 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 NQO1P15559 274 aaKnown RBP13.32□□□□□ -0.28
RNF4-210ENST00000508235 MSX2P35548 267 aaPredicted RBP13.32□□□□□ -0.28
RNF4-210ENST00000508235 KIR2DL3P43628 341 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 OR3A2P47893 321 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 BNIP1Q12981 228 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 TRAM2Q15035 370 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 POU4F3Q15319 338 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 TFAP2EQ6VUC0 442 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 WDR88Q6ZMY6 472 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 TSPYL5Q86VY4 417 aaPredicted RBP13.32□□□□□ -0.28
RNF4-210ENST00000508235 DHFR2Q86XF0 187 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 P3H2Q8IVL5 708 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 OFCC1Q8IZS5 231 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 TMEM239Q8WW34 195 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 TMEM45BQ96B21 275 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 APH1AQ96BI3 265 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 ASB9Q96DX5 294 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 OXGR1Q96P68 337 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 PRSS27Q9BQR3 290 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 BTBD10Q9BSF8 475 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 THTPAQ9BU02 230 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 FKRPQ9H9S5 495 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 KCNN3Q9UGI6 736 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 NDRG3Q9UGV2 375 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 FLVCR1Q9Y5Y0 555 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 ENPP4Q9Y6X5 453 aa13.32□□□□□ -0.28
RNF4-210ENST00000508235 USP9YO00507 2555 aaPredicted RBP13.31□□□□□ -0.28
RNF4-210ENST00000508235 LOC102725191A0A1B0GVB3 256 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 C16orf97H3BN30 126 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 M0R082 166 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 RAMP1O60894 148 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 BGLAPP02818 100 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 MT-ND1P03886 318 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 HIST1H2ABP04908 130 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 ZNF43P17038 809 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 RHCEP18577 417 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 GRPRP30550 384 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 YAP1P46937 504 aaKnown RBP13.31□□□□□ -0.28
RNF4-210ENST00000508235 P2RY4P51582 365 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 PMS2P3Q13401 168 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 P2RY6Q15077 328 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 ZNF74Q16587 644 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 EXOC3L2Q2M3D2 409 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 HIST3H2AQ7L7L0 130 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 OR9K2Q8NGE7 335 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 ZNF417Q8TAU3 575 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 FAM222BQ8WU58 562 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 TMEM255BQ8WV15 326 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 HIST1H2ACQ93077 130 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 LRGUKQ96M69 825 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 ZNF587Q96SQ5 575 aaPredicted RBP13.31□□□□□ -0.28
RNF4-210ENST00000508235 HDHD5Q9BXW7 423 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 TRIM15Q9C019 465 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 ANKRD19PQ9H560 264 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 NANSQ9NR45 359 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 MRPL39Q9NYK5 338 aaKnown RBP13.31□□□□□ -0.28
RNF4-210ENST00000508235 ZNF229Q9UJW7 825 aa13.31□□□□□ -0.28
RNF4-210ENST00000508235 KPNA4O00629 521 aaPredicted RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 AKAP8O43823 692 aaKnown RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 DNAJC8O75937 253 aaPredicted RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 PDE5AO76074 875 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 OR6A2O95222 327 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 PPP3CBP16298 524 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 CBLP22681 906 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 UGT2B10P36537 528 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 SMIM11AP58511 58 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 IL1RL1Q01638 556 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 FAM27E3Q08E93 113 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 TRAP1Q12931 704 aaKnown RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 C1DQ13901 141 aaKnown RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 ZNF787Q6DD87 383 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 HIST2H2BCQ6DN03 193 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 LCN8Q6JVE9 175 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 Q6ZT83 130 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 CREB3L2Q70SY1 520 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 RRM2BQ7LG56 351 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 AAED1Q7RTV5 226 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 NKAIN4Q8IVV8 208 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 OR5J2Q8NH18 312 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 ZNF775Q96BV0 537 aaPredicted RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 SLC7A6OSQ96CW6 309 aaPredicted RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 MOGAT1Q96PD6 335 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 USB1Q9BQ65 265 aaKnown RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 OR10A4Q9H209 315 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 NDUFAF4Q9P032 175 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 GPR52Q9Y2T5 361 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 V9GYQ6 96 aa13.3□□□□□ -0.28
RNF4-210ENST00000508235 SPTAN1Q13813 2472 aaKnown RBP13.3□□□□□ -0.28
RNF4-210ENST00000508235 PTPN13Q12923 2485 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 OR6C65A6NJZ3 312 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 J3KTA2 159 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 CH25HO95992 272 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms