RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 RAB18Q9NP72 206 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 THSD1Q9NS62 852 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 CYSLTR2Q9NS75 346 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 MARCH4Q9P2E8 410 aaPredicted RBP4.57□□□□□ -1.68
EPHA3-202ENST00000452448 HEY2Q9UBP5 337 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 DKK4Q9UBT3 224 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 FBXL7Q9UJT9 491 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 PPIEQ9UNP9 301 aaKnown RBP4.57□□□□□ -1.68
EPHA3-202ENST00000452448 HS3ST3A1Q9Y663 406 aa4.57□□□□□ -1.68
EPHA3-202ENST00000452448 hCG_38984A0A1B0GV85 526 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 A0A1W2PRX2 142 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 LRIT2A6NDA9 550 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 C9J4A7 227 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 RNF225M0QZC1 329 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 SOX1O00570 391 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 CLIC2O15247 247 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 LALBAP00709 142 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 HPP00738 406 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 HPRP00739 348 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 CST4P01036 141 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 PDYNP01213 254 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 MBPP02686 304 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 PRKCGP05129 697 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 BPGMP07738 259 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 OR10J4P0C629 311 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 FGF5P12034 268 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 UCHL3P15374 230 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 EGR1P18146 543 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 RPL10P27635 214 aaKnown RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 SNU13P55769 128 aaKnown RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 RAB25P57735 213 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 CKS1BP61024 79 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 TTLL4Q14679 1199 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 MRPL23Q16540 153 aaKnown RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 LRRC26Q2I0M4 334 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 FAM182AQ5T1J6 154 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 N4BP2L1Q5TBK1 243 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 KDM4DQ6B0I6 523 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 ASPHD2Q6ICH7 369 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 C17orf99Q6UX52 265 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 RSPO2Q6UXX9 243 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 ADCK2Q7Z695 626 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 TMED4Q7Z7H5 227 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 LRRC28Q86X40 367 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 TRAPPC5Q8IUR0 188 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 SLC22A15Q8IZD6 547 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 GTPBP8Q8N3Z3 284 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 Q8N402 240 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 OR2AK2Q8NG84 335 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 OR10G3Q8NGC4 313 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 OR1K1Q8NGR3 316 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 OSTF1Q92882 214 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 UBE2FQ969M7 185 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 PIGTQ969N2 578 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 CTHRC1Q96CG8 243 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 WDR89Q96FK6 387 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 NEDD4LQ96PU5 975 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 ZSWIM1Q9BR11 485 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 TMEM43Q9BTV4 400 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 NUAK2Q9H093 628 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 S1PR5Q9H228 398 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 NELFAQ9H3P2 528 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 FN3KQ9H479 309 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 UBE2ZQ9H832 354 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 PLEKHA2Q9HB19 425 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 POPDC2Q9HBU9 364 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 SEMA4BQ9NPR2 832 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 GAR1Q9NY12 217 aaKnown RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 PITPNC1Q9UKF7 332 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 TFR2Q9UP52 801 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 FARSAQ9Y285 508 aaKnown RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 MYH3P11055 1940 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 LOC105371242A0A075B767 164 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 SSU72P8A0A1W2PR75 194 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 NPIPB9F8W1W9 429 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 H0Y980 276 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 SGK494L7N484 410 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 P2RY10O00398 339 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 LAMTOR5O43504 91 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 PLRG1O43660 514 aaKnown RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 GNG7O60262 68 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 UPK3AO75631 287 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 ALDOCP09972 364 aaKnown RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 ZNF14P17017 642 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 TSPAN8P19075 237 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 COMTP21964 271 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 HRH2P25021 359 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 GKP32189 559 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 CFHR2P36980 270 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 FOXL2P58012 376 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 SEC61GP60059 68 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 ERVFRD-1P60508 538 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 EMX1Q04741 257 aaPredicted RBP4.56□□□□□ -1.68
EPHA3-202ENST00000452448 TNK2Q07912 1038 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 RBBP4Q09028 425 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 IL17AQ16552 155 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 NKG7Q16617 165 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 PYCR3Q53H96 274 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 SLC25A53Q5H9E4 307 aa4.56□□□□□ -1.68
EPHA3-202ENST00000452448 TFDP3Q5H9I0 405 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms