RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PTGS2P35354 604 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 TALDO1P37837 337 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 RBM34P42696 430 aaKnown RBP11.6□□□□□ -0.55
DDX39A-202ENST00000324340 P2RX1P51575 399 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 DLX5P56178 289 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 LSM3P62310 102 aaKnown RBP11.6□□□□□ -0.55
DDX39A-202ENST00000324340 RPP38P78345 283 aaKnown RBP11.6□□□□□ -0.55
DDX39A-202ENST00000324340 SCN1BQ07699 218 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 FOXC1Q12948 553 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 CARTPTQ16568 116 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 ALG10BQ5I7T1 473 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 ARMC4Q5T2S8 1044 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 CD300LDQ6UXZ3 194 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 WDR88Q6ZMY6 472 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 MBOAT2Q6ZWT7 520 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 VASH2Q86V25 355 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 OR5W2Q8NH69 310 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 LHFPL5Q8TAF8 219 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 PAQR8Q8TEZ7 354 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 DUSP19Q8WTR2 217 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 TMEM255BQ8WV15 326 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 SGCZQ96LD1 299 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 HS6ST2Q96MM7 605 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 SDHCQ99643 169 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-202ENST00000324340 KCNN2Q9H2S1 579 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 SDHAF3Q9NRP4 125 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 TBC1D24Q9ULP9 559 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 STUB1Q9UNE7 303 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 GMPPBQ9Y5P6 360 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 CPAMD8Q8IZJ3 1885 aa11.6□□□□□ -0.55
DDX39A-202ENST00000324340 MST1P26927 711 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 MSX1P28360 303 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 IFNGR2P38484 337 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 OMPP47874 163 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 IDH2P48735 452 aaKnown RBP11.59□□□□□ -0.55
DDX39A-202ENST00000324340 RRADP55042 308 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 COX10Q12887 443 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 SRSF6Q13247 344 aaKnown RBP11.59□□□□□ -0.55
DDX39A-202ENST00000324340 CBFBQ13951 182 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 B3GNTL1Q67FW5 361 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-202ENST00000324340 SLC30A6Q6NXT4 461 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 IL20RBQ6UXL0 311 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF730Q6ZMV8 503 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 SPATC1Q76KD6 591 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF367Q7RTV3 350 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 KCTD20Q7Z5Y7 419 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 ZER1Q7Z7L7 766 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 CADM2Q8N3J6 435 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 TMEM156Q8N614 296 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 CLEC1AQ8NC01 280 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 CNIH3Q8TBE1 160 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 C3orf49Q96BT1 292 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF524Q96C55 264 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 TMEM80Q96HE8 168 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 SCNM1Q9BWG6 230 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 ANGPTL4Q9BY76 406 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 ADAM19Q9H013 955 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 METTL7AQ9H8H3 244 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 GALNT9Q9HCQ5 603 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 HPF1Q9NWY4 346 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 KLRF1Q9NZS2 232 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 RPS6KB2Q9UBS0 482 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 ENOPH1Q9UHY7 261 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 TEKT2Q9UIF3 430 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 FBXO9Q9UK97 447 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-202ENST00000324340 WIF1Q9Y5W5 379 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 WDFY3Q8IZQ1 3526 aa11.59□□□□□ -0.55
DDX39A-202ENST00000324340 PTPRZ1P23471 2315 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-202ENST00000324340 HEATR5AQ86XA9 2040 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 A0A087WUJ7 227 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 CCDC182A6NF36 153 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 ANKUB1A6NFN9 424 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 C17orf51A8MQB3 221 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 C12orf71A8MTZ7 269 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 B4DXG7 233 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 ETV2O00321 342 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-202ENST00000324340 KLF4O43474 513 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 NTN1O95631 604 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 FADS2O95864 444 aaKnown RBP11.58□□□□□ -0.56
DDX39A-202ENST00000324340 WT1P19544 449 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-202ENST00000324340 PGCP20142 388 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 GSTM3P21266 225 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 SLC1A3P43003 542 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 LSM11P83369 360 aaKnown RBP eCLIP11.58□□□□□ -0.56
DDX39A-202ENST00000324340 NPRL3Q12980 569 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 TIGD6Q17RP2 521 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 COL28A1Q2UY09 1125 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 ZNF468Q5VIY5 522 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-202ENST00000324340 SLC22A10Q63ZE4 541 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 BICRALQ6AI39 1079 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 KLHL17Q6TDP4 642 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 RTL4Q6ZR62 310 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 PRICKLE2Q7Z3G6 844 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 NRARPQ7Z6K4 114 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 GALNT5Q7Z7M9 940 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 ATG4DQ86TL0 474 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-202ENST00000324340 BEST3Q8N1M1 668 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 GDPD1Q8N9F7 314 aa11.58□□□□□ -0.56
DDX39A-202ENST00000324340 GPR119Q8TDV5 335 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms